PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Garb01G0030910 Flavonoid F3H medium borderline
Garb02G0000880 Flavonoid F3H low borderline
Garb02G0007420 Flavonoid F3H low borderline
Garb02G0010390 Flavonoid F3H medium borderline
Garb02G0013090 Flavonoid F3H medium borderline
Garb02G0014250 Flavonoid F3H medium borderline
Garb03G0000620 Flavonoid F3H medium borderline
Garb03G0000640 Flavonoid F3H medium borderline
Garb03G0000650 Flavonoid F3H medium borderline
Garb03G0000660 Flavonoid F3H medium pass
Garb03G0000670 Flavonoid F3H medium borderline
Garb03G0003250 Flavonoid F3H medium borderline
Garb03G0004230 Flavonoid F3H medium borderline
Garb03G0006330 Flavonoid F3H medium borderline
Garb03G0006340 Flavonoid F3H low borderline
Garb03G0008860 Flavonoid F3H medium borderline
Garb03G0011800 Flavonoid F3H medium borderline
Garb03G0013670 Flavonoid F3H medium borderline
Garb03G0013680 Flavonoid F3H medium borderline
Garb03G0013690 Flavonoid F3H medium borderline
Garb03G0014360 Flavonoid F3H low borderline
Garb03G0014370 Flavonoid F3H medium borderline
Garb03G0015760 Flavonoid F3H medium borderline
Garb03G0020460 Flavonoid F3H low borderline
Garb03G0020470 Flavonoid F3H low borderline
Garb03G0020820 Flavonoid F3H medium borderline
Garb03G0026390 Flavonoid F3H low borderline
Garb03G0026400 Flavonoid F3H low borderline
Garb03G0026410 Flavonoid F3H medium pass
Garb04G0003680 Flavonoid F3H medium borderline
Garb04G0022030 Flavonoid F3H medium borderline
Garb04G0025600 Flavonoid F3H medium borderline
Garb04G0026430 Flavonoid F3H low borderline
Garb04G0026450 Flavonoid F3H low borderline
Garb04G0026460 Flavonoid F3H low borderline
Garb04G0034940 Flavonoid F3H medium borderline
Garb05G0007000 Flavonoid F3H medium borderline
Garb05G0009030 Flavonoid F3H low borderline
Garb05G0009170 Flavonoid F3H low borderline
Garb05G0012430 Flavonoid F3H medium borderline
Garb05G0012440 Flavonoid F3H medium borderline
Garb05G0012470 Flavonoid F3H medium borderline
Garb05G0012600 Flavonoid F3H medium borderline
Garb05G0012610 Flavonoid F3H medium borderline
Garb05G0012620 Flavonoid F3H medium borderline
Garb05G0012630 Flavonoid F3H low borderline
Garb05G0013450 Flavonoid F3H medium borderline
Garb05G0016540 Flavonoid F3H medium borderline
Garb06G0007600 Flavonoid F3H low borderline
Garb06G0013470 Flavonoid F3H medium borderline