PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Garb11G0024410 Steroid BR6OX2/CYP85A2 low borderline
Garb12G0017310 Steroid BR6OX2/CYP85A2 low borderline
Garb12G0027800 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0002860 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0004010 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0004930 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0010830 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0011620 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0013810 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0014480 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0033400 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0013290 Steroid CAS medium pass
Garb03G0000390 Steroid CAS medium pass
Garb03G0002180 Steroid CAS medium pass
Garb03G0005030 Steroid CAS medium pass
Garb04G0000560 Steroid CAS medium pass
Garb04G0000660 Steroid CAS medium pass
Garb04G0004930 Steroid CAS medium pass
Garb04G0004940 Steroid CAS medium pass
Garb04G0006080 Steroid CAS medium pass
Garb04G0013090 Steroid CAS medium pass
Garb04G0018640 Steroid CAS medium pass
Garb04G0019890 Steroid CAS low borderline
Garb04G0026040 Steroid CAS low borderline
Garb04G0033130 Steroid CAS low borderline
Garb04G0033200 Steroid CAS low borderline
Garb04G0033720 Steroid CAS medium pass
Garb07G0020320 Steroid CAS medium pass
Garb07G0024190 Steroid CAS medium pass
Garb08G0011230 Steroid CAS medium pass
Garb08G0014220 Steroid CAS medium pass
Garb08G0014240 Steroid CAS medium pass
Garb08G0014250 Steroid CAS medium pass
Garb08G0014260 Steroid CAS medium pass
Garb08G0014270 Steroid CAS medium pass
Garb08G0025100 Steroid CAS medium pass
Garb08G0026510 Steroid CAS medium pass
Garb08G0027630 Steroid CAS medium pass
Garb08G0027640 Steroid CAS medium pass
Garb09G0000070 Steroid CAS medium pass
Garb09G0009440 Steroid CAS medium pass
Garb09G0020090 Steroid CAS medium pass
Garb09G0022350 Steroid CAS medium pass
Garb10G0003060 Steroid CAS medium pass
Garb10G0006410 Steroid CAS medium pass
Garb10G0016210 Steroid CAS medium pass
Garb10G0016220 Steroid CAS medium pass
Garb10G0016250 Steroid CAS medium pass
Garb10G0024030 Steroid CAS medium pass
Garb10G0024050 Steroid CAS medium pass