PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Garb10G0024550 Steroid CAS medium pass
Garb10G0024590 Steroid CAS medium pass
Garb10G0030650 Steroid CAS medium pass
Garb10G0030690 Steroid CAS medium pass
Garb10G0038250 Steroid CAS medium pass
Garb10G0039650 Steroid CAS low borderline
Garb10G0039670 Steroid CAS medium pass
Garb11G0002570 Steroid CAS medium pass
Garb11G0007150 Steroid CAS medium pass
Garb11G0013440 Steroid CAS medium pass
Garb11G0031920 Steroid CAS medium pass
Garb11G0031930 Steroid CAS medium pass
Garb11G0033890 Steroid CAS medium pass
Garb12G0023230 Steroid CAS medium pass
Garb13G0002150 Steroid CAS medium pass
Garb13G0002160 Steroid CAS medium pass
Garb13G0007850 Steroid CAS medium pass
Garb13G0024360 Steroid CAS medium pass
Garb13G0024370 Steroid CAS medium pass
Garb13G0027080 Steroid CAS medium pass
Garb13G0027880 Steroid CAS medium pass
Garb13G0027900 Steroid CAS low borderline
Garb13G0028230 Steroid CAS medium pass
Garb13G0029370 Steroid CAS medium pass
Garb13G0031310 Steroid CAS medium pass
Garb13G0031320 Steroid CAS medium pass
Garb03G0018030 Steroid CPD/CYP90A1 low borderline
Garb04G0012240 Steroid CPD/CYP90A1 low borderline
Garb04G0031890 Steroid CPD/CYP90A1 medium borderline
Garb05G0012010 Steroid CPD/CYP90A1 low borderline
Garb05G0016140 Steroid CPD/CYP90A1 low borderline
Garb06G0000880 Steroid CPD/CYP90A1 medium borderline
Garb06G0007190 Steroid CPD/CYP90A1 low borderline
Garb06G0014420 Steroid CPD/CYP90A1 medium borderline
Garb06G0017470 Steroid CPD/CYP90A1 low borderline
Garb06G0029000 Steroid CPD/CYP90A1 low borderline
Garb07G0030750 Steroid CPD/CYP90A1 low borderline
Garb09G0000100 Steroid CPD/CYP90A1 medium borderline
Garb09G0017890 Steroid CPD/CYP90A1 low borderline
Garb11G0016740 Steroid CPD/CYP90A1 medium borderline
Garb11G0021190 Steroid CPD/CYP90A1 medium borderline
Garb12G0011380 Steroid CPD/CYP90A1 low borderline
Garb12G0026660 Steroid CPD/CYP90A1 medium borderline
Garb12G0029910 Steroid CPD/CYP90A1 low borderline
Garb13G0022430 Steroid CPD/CYP90A1 medium borderline
Garb13G0025740 Steroid CPD/CYP90A1 low borderline
Garb01G0021090 Steroid CPI1 high pass
Garb01G0013420 Steroid CYP51G1 medium borderline
Garb02G0003770 Steroid CYP51G1 medium borderline
Garb03G0013810 Steroid CYP51G1 low borderline