PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Garb06G0002780 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Garb06G0007980 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Garb06G0008480 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Garb06G0008540 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Garb06G0011710 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Garb06G0012900 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Garb06G0013720 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
Garb06G0016740 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Garb06G0018810 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
Garb06G0020570 Terpenoid CYP76 medium borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
Garb06G0021640 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Garb06G0022110 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Garb06G0025650 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb06G0026500 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Garb06G0028480 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
Garb06G0029000 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Garb06G0030720 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Garb06G0030730 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Garb06G0033100 Terpenoid CYP76 medium pass CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM
Garb06G0033110 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb06G0033120 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb06G0033130 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb07G0002690 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Garb07G0011720 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Garb07G0011730 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb07G0011740 Terpenoid CYP76 medium borderline CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM
Garb07G0011750 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb07G0011760 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb07G0024960 Terpenoid CYP76 medium pass CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Garb07G0024970 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Garb07G0024980 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb07G0026780 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb07G0028520 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb07G0030820 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Garb07G0030840 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Garb07G0031650 Terpenoid CYP76 low borderline CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT
Garb07G0031700 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb07G0031710 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Garb07G0031730 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Garb07G0031740 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Garb07G0031750 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Garb07G0031780 Terpenoid CYP76 medium pass CYP76__00024__sp_W0FKI0_DOX1_PERHD
Garb07G0031850 Terpenoid CYP76 low borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
Garb07G0033180 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Garb08G0001970 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Garb08G0002200 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb08G0002210 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Garb08G0002230 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Garb08G0002250 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Garb08G0006050 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU