PlantSME Plant secondary metabolism enzyme database

Oryza nivara (oryza_nivara)

Imported from atlas release summary for Oryza nivara.

2400
Candidate Protein Records
1919
Pathway-Level Records
5100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 573 19 BAHD (237) View species results
Alkaloid pathway 445 24 7DLGT (78) View species results
Phenylpropanoid pathway 308 12 POD (101) View species results
Flavonoid pathway 306 13 UFGT (191) View species results
Rosmarinic acid pathway 150 7 C4H (77) View species results
Steroid pathway 137 13 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 401 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
ONIVA05G19250.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA05G22030.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA05G24320.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA05G27470.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA05G29230.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G00090.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G00640.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G01070.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G02150.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G02150.2 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G06820.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G06830.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G07760.1 Phenylpropanoid C3'H/CYP98A medium pass
ONIVA06G07930.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G07960.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G11840.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G14720.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G14860.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G15520.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G17020.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G18770.2 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G18990.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G19030.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G22530.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G22720.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G22720.2 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G22750.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G23690.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA06G24750.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G24910.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G25720.1 Phenylpropanoid C3'H/CYP98A medium pass
ONIVA06G26290.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G26300.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G26310.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G26320.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA06G26340.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA07G05910.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA07G09350.1 Phenylpropanoid C3'H/CYP98A medium borderline
ONIVA07G09740.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G10710.1 Phenylpropanoid C3'H/CYP98A medium pass
ONIVA07G12890.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G13050.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G13050.2 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G14630.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G14660.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G14670.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G14680.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G14680.2 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G14700.1 Phenylpropanoid C3'H/CYP98A low borderline
ONIVA07G14760.1 Phenylpropanoid C3'H/CYP98A low borderline