PlantSME Plant secondary metabolism enzyme database

Oryza officinalis (oryza_officinalis)

Imported from atlas release summary for Oryza officinalis.

2518
Candidate Protein Records
1998
Pathway-Level Records
4847
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 584 19 BAHD (239) View species results
Alkaloid pathway 440 23 7DLGT (66) View species results
Phenylpropanoid pathway 392 11 POD (200) View species results
Flavonoid pathway 249 12 UFGT (138) View species results
Steroid pathway 177 13 SMT1/SMT2/SMT3 (67) View species results
Rosmarinic acid pathway 156 7 C4H (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1683 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 408 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
OoffiChr11g01045.1 Terpenoid BAHD medium pass BAHD__00038__sp_Q3EC11_ZDHC2_ARATH
OoffiChr11g01045.2 Terpenoid BAHD medium pass BAHD__00038__sp_Q3EC11_ZDHC2_ARATH
OoffiChr11g01370.1 Terpenoid BAHD medium pass BAHD__00040__sp_Q41745_LPAT_MAIZE
OoffiChr11g01370.2 Terpenoid BAHD medium pass BAHD__00040__sp_Q41745_LPAT_MAIZE
OoffiChr11g01370.3 Terpenoid BAHD medium pass BAHD__00040__sp_Q41745_LPAT_MAIZE
OoffiChr11g01576.1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
OoffiChr12g00345.1 Terpenoid BAHD medium pass BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
OoffiChr12g00714.1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
OoffiChr12g00715.1 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
OoffiChr12g00716.1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
OoffiChr12g00717.1 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
OoffiChr12g00899.1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
OoffiChr12g00899.2 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
OoffiChr12g00899.3 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
OoffiChr12g00913.1 Terpenoid BAHD medium pass BAHD__00084__sp_Q9M115_ZDH16_ARATH
OoffiChr12g01131.1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
OoffiChr12g01160.1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
OoffiChr12g01207.1 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
OoffiChr12g01207.2 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
OoffiChr12g01207.3 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
OoffiChr12g01207.4 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
OoffiChr12g01207.5 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
OoffiChr12g01257.1 Terpenoid BAHD low borderline BAHD__00002__sp_A0A068BIF1_AT9_ACTER
OoffiChr12g01438.1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
OoffiChr12g01570.1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH