PlantSME Plant secondary metabolism enzyme database

Oryza officinalis (oryza_officinalis)

Imported from atlas release summary for Oryza officinalis.

2518
Candidate Protein Records
1998
Pathway-Level Records
4847
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 584 19 BAHD (239) View species results
Alkaloid pathway 440 23 7DLGT (66) View species results
Phenylpropanoid pathway 392 11 POD (200) View species results
Flavonoid pathway 249 12 UFGT (138) View species results
Steroid pathway 177 13 SMT1/SMT2/SMT3 (67) View species results
Rosmarinic acid pathway 156 7 C4H (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1683 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 408 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
OoffiChr06g01159.1 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
OoffiChr06g01162.1 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
OoffiChr06g01703.1 Alkaloid NMT medium borderline NMT__00014__sp_C3SBW0_PNMT_THLFG
OoffiChr06g02524.1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
OoffiChr06g02524.2 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
OoffiChr06g02524.3 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
OoffiChr06g02524.6 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
OoffiChr06g02524.7 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
OoffiChr07g00676.1 Alkaloid NMT low borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
OoffiChr07g00676.2 Alkaloid NMT low borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
OoffiChr07g00806.1 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
OoffiChr07g01201.1 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
OoffiChr07g02266.1 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
OoffiChr07g02445.1 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
OoffiChr07g02445.2 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
OoffiChr07g02445.3 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
OoffiChr07g02445.4 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
OoffiChr07g02445.5 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
OoffiChr08g00047.1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
OoffiChr08g00479.1 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
OoffiChr08g00479.2 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
OoffiChr08g00479.3 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
OoffiChr08g00479.4 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
OoffiChr08g00479.5 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
OoffiChr08g01041.1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
OoffiChr08g01041.2 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
OoffiChr08g01041.3 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
OoffiChr08g01042.1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
OoffiChr08g01239.1 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
OoffiChr08g01929.1 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
OoffiChr08g01929.2 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
OoffiChr09g00041.1 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
OoffiChr09g00041.2 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
OoffiChr09g00041.3 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
OoffiChr09g00041.4 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
OoffiChr09g00041.5 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
OoffiChr09g00041.6 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
OoffiChr09g00041.7 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
OoffiChr09g00041.8 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
OoffiChr09g00355.1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
OoffiChr09g00505.1 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
OoffiChr09g00520.1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
OoffiChr09g00520.2 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
OoffiChr09g00669.1 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
OoffiChr09g00669.2 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
OoffiChr09g00691.1 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
OoffiChr09g01552.1 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
OoffiChr09g01552.2 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
OoffiChr09g01552.3 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
OoffiChr09g01552.4 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH