PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

2119
Candidate Protein Records
1810
Pathway-Level Records
4435
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ027156 Terpenoid CYP76 low borderline
silene_latifolia_GWHPCBIJ027412 Terpenoid CYP76 low borderline
silene_latifolia_GWHPCBIJ027501 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ027504 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ028020 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ028082 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ028481 Terpenoid CYP76 medium pass
silene_latifolia_GWHPCBIJ028751 Terpenoid CYP76 medium pass
silene_latifolia_GWHPCBIJ029016 Terpenoid CYP76 low borderline
silene_latifolia_GWHPCBIJ029017 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ029043 Terpenoid CYP76 low borderline
silene_latifolia_GWHPCBIJ029301 Terpenoid CYP76 low borderline
silene_latifolia_GWHPCBIJ029308 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ030544 Terpenoid CYP76 medium pass
silene_latifolia_GWHPCBIJ031107 Terpenoid CYP76 medium pass
silene_latifolia_GWHPCBIJ031129 Terpenoid CYP76 medium pass
silene_latifolia_GWHPCBIJ031308 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ031309 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ031310 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ031311 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ031312 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ031313 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ031593 Terpenoid CYP76 low borderline
silene_latifolia_GWHPCBIJ031944 Terpenoid CYP76 low borderline
silene_latifolia_GWHPCBIJ034937 Terpenoid CYP76 medium pass
silene_latifolia_GWHPCBIJ035365 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ035497 Terpenoid CYP76 medium pass
silene_latifolia_GWHPCBIJ035998 Terpenoid CYP76 medium pass
silene_latifolia_GWHPCBIJ036420 Terpenoid CYP76 medium pass
silene_latifolia_GWHPCBIJ036812 Terpenoid CYP76 medium pass
silene_latifolia_GWHPCBIJ036981 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ036982 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ037151 Terpenoid CYP76 medium borderline
silene_latifolia_GWHPCBIJ005699 Terpenoid DXR high pass
silene_latifolia_GWHPCBIJ006335 Terpenoid DXR high pass
silene_latifolia_GWHPCBIJ017617 Terpenoid DXR medium pass
silene_latifolia_GWHPCBIJ037364 Terpenoid DXR medium pass
silene_latifolia_GWHPCBIJ000712 Terpenoid DXS medium pass
silene_latifolia_GWHPCBIJ016383 Terpenoid DXS medium pass
silene_latifolia_GWHPCBIJ020071 Terpenoid DXS medium pass
silene_latifolia_GWHPCBIJ020099 Terpenoid DXS medium pass
silene_latifolia_GWHPCBIJ026467 Terpenoid DXS low borderline
silene_latifolia_GWHPCBIJ000655 Terpenoid FPPS medium pass
silene_latifolia_GWHPCBIJ005946 Terpenoid FPPS medium pass
silene_latifolia_GWHPCBIJ016655 Terpenoid FPPS low borderline
silene_latifolia_GWHPCBIJ016656 Terpenoid FPPS medium pass
silene_latifolia_GWHPCBIJ021164 Terpenoid FPPS medium pass
silene_latifolia_GWHPCBIJ023184 Terpenoid FPPS medium pass
silene_latifolia_GWHPCBIJ024138 Terpenoid FPPS medium pass
silene_latifolia_GWHPCBIJ030337 Terpenoid FPPS medium pass