PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

2119
Candidate Protein Records
1810
Pathway-Level Records
4435
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ035477 Terpenoid FPPS medium pass
silene_latifolia_GWHPCBIJ036441 Terpenoid FPPS medium pass
silene_latifolia_GWHPCBIJ036444 Terpenoid FPPS medium pass
silene_latifolia_GWHPCBIJ007308 Terpenoid GGPPS medium borderline
silene_latifolia_GWHPCBIJ011926 Terpenoid GGPPS medium borderline
silene_latifolia_GWHPCBIJ018255 Terpenoid GGPPS medium borderline
silene_latifolia_GWHPCBIJ028978 Terpenoid GGPPS medium borderline
silene_latifolia_GWHPCBIJ028979 Terpenoid GGPPS medium borderline
silene_latifolia_GWHPCBIJ014487 Terpenoid GPPS medium borderline
silene_latifolia_GWHPCBIJ025133 Terpenoid GPPS medium borderline
silene_latifolia_GWHPCBIJ036677 Terpenoid HDR/IspH high pass
silene_latifolia_GWHPCBIJ037427 Terpenoid HDR/IspH high pass
silene_latifolia_GWHPCBIJ006891 Terpenoid HDS/IspG high pass
silene_latifolia_GWHPCBIJ007832 Terpenoid HMGR medium pass
silene_latifolia_GWHPCBIJ011578 Terpenoid HMGR medium pass
silene_latifolia_GWHPCBIJ021202 Terpenoid HMGR medium pass
silene_latifolia_GWHPCBIJ025125 Terpenoid HMGR low borderline
silene_latifolia_GWHPCBIJ029261 Terpenoid HMGR medium pass
silene_latifolia_GWHPCBIJ036736 Terpenoid HMGR medium pass
silene_latifolia_GWHPCBIJ017726 Terpenoid HMGS high pass
silene_latifolia_GWHPCBIJ022912 Terpenoid HMGS high pass
silene_latifolia_GWHPCBIJ012852 Terpenoid IDI medium pass
silene_latifolia_GWHPCBIJ020915 Terpenoid IDI medium pass
silene_latifolia_GWHPCBIJ028792 Terpenoid MCT/IspD high pass
silene_latifolia_GWHPCBIJ017845 Terpenoid MDS/IspF high pass
silene_latifolia_GWHPCBIJ022877 Terpenoid MVD medium pass
silene_latifolia_GWHPCBIJ025074 Terpenoid MVD low borderline
silene_latifolia_GWHPCBIJ027715 Terpenoid MVD low borderline
silene_latifolia_GWHPCBIJ007406 Terpenoid MVK low borderline
silene_latifolia_GWHPCBIJ013691 Terpenoid MVK medium pass
silene_latifolia_GWHPCBIJ018960 Terpenoid MVK low borderline
silene_latifolia_GWHPCBIJ029274 Terpenoid MVK low borderline
silene_latifolia_GWHPCBIJ031037 Terpenoid MVK low borderline
silene_latifolia_GWHPCBIJ000755 Terpenoid PMK medium pass
silene_latifolia_GWHPCBIJ003512 Terpenoid PMK low borderline
silene_latifolia_GWHPCBIJ014622 Terpenoid PMK low borderline
silene_latifolia_GWHPCBIJ002323 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ004269 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ010213 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ010215 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ010221 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ010225 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ013165 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ013168 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ013169 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ013171 Terpenoid TPS medium borderline
silene_latifolia_GWHPCBIJ013182 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ013185 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ013186 Terpenoid TPS medium pass
silene_latifolia_GWHPCBIJ013187 Terpenoid TPS medium pass