PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

2119
Candidate Protein Records
1810
Pathway-Level Records
4435
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ027829 Alkaloid H6H medium borderline
silene_latifolia_GWHPCBIJ030812 Alkaloid H6H high pass
silene_latifolia_GWHPCBIJ031297 Alkaloid H6H medium pass
silene_latifolia_GWHPCBIJ031300 Alkaloid H6H medium pass
silene_latifolia_GWHPCBIJ031850 Alkaloid H6H medium borderline
silene_latifolia_GWHPCBIJ032545 Alkaloid H6H medium borderline
silene_latifolia_GWHPCBIJ032552 Alkaloid H6H high pass
silene_latifolia_GWHPCBIJ032761 Alkaloid H6H medium borderline
silene_latifolia_GWHPCBIJ032763 Alkaloid H6H medium borderline
silene_latifolia_GWHPCBIJ034585 Alkaloid H6H medium pass
silene_latifolia_GWHPCBIJ035506 Alkaloid H6H medium borderline
silene_latifolia_GWHPCBIJ035805 Alkaloid H6H low borderline
silene_latifolia_GWHPCBIJ035807 Alkaloid H6H medium borderline
silene_latifolia_GWHPCBIJ036328 Alkaloid H6H high pass
silene_latifolia_GWHPCBIJ036370 Alkaloid H6H medium borderline
silene_latifolia_GWHPCBIJ037454 Alkaloid H6H medium borderline
silene_latifolia_GWHPCBIJ002826 Alkaloid IO medium borderline
silene_latifolia_GWHPCBIJ003268 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ006072 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ006405 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ006406 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ006486 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ006487 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ010210 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ010568 Alkaloid IO medium borderline
silene_latifolia_GWHPCBIJ012719 Alkaloid IO medium borderline
silene_latifolia_GWHPCBIJ013556 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ014207 Alkaloid IO medium borderline
silene_latifolia_GWHPCBIJ016270 Alkaloid IO medium borderline
silene_latifolia_GWHPCBIJ017712 Alkaloid IO medium borderline
silene_latifolia_GWHPCBIJ017748 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ020555 Alkaloid IO medium borderline
silene_latifolia_GWHPCBIJ022896 Alkaloid IO medium borderline
silene_latifolia_GWHPCBIJ027156 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ027157 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ036420 Alkaloid IO medium borderline
silene_latifolia_GWHPCBIJ036979 Alkaloid IO low borderline
silene_latifolia_GWHPCBIJ012763 Alkaloid ISY medium pass
silene_latifolia_GWHPCBIJ023185 Alkaloid ISY medium pass
silene_latifolia_GWHPCBIJ025022 Alkaloid ISY medium pass
silene_latifolia_GWHPCBIJ031713 Alkaloid ISY medium pass
silene_latifolia_GWHPCBIJ001612 Alkaloid LAMT medium borderline
silene_latifolia_GWHPCBIJ010993 Alkaloid LAMT medium borderline
silene_latifolia_GWHPCBIJ011799 Alkaloid LAMT medium pass
silene_latifolia_GWHPCBIJ013318 Alkaloid LAMT medium borderline
silene_latifolia_GWHPCBIJ015677 Alkaloid LAMT medium borderline
silene_latifolia_GWHPCBIJ027065 Alkaloid LAMT medium borderline
silene_latifolia_GWHPCBIJ027069 Alkaloid LAMT medium borderline
silene_latifolia_GWHPCBIJ031780 Alkaloid LAMT medium borderline
silene_latifolia_GWHPCBIJ032694 Alkaloid LAMT medium borderline