PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

2119
Candidate Protein Records
1810
Pathway-Level Records
4435
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ036812 Phenylpropanoid C3'H/CYP98A medium borderline
silene_latifolia_GWHPCBIJ036981 Phenylpropanoid C3'H/CYP98A medium borderline
silene_latifolia_GWHPCBIJ036982 Phenylpropanoid C3'H/CYP98A low borderline
silene_latifolia_GWHPCBIJ037148 Phenylpropanoid C3'H/CYP98A medium borderline
silene_latifolia_GWHPCBIJ037150 Phenylpropanoid C3'H/CYP98A medium borderline
silene_latifolia_GWHPCBIJ037151 Phenylpropanoid C3'H/CYP98A medium borderline
silene_latifolia_GWHPCBIJ037507 Phenylpropanoid C3'H/CYP98A low borderline
silene_latifolia_GWHPCBIJ002392 Phenylpropanoid C4H/CYP73A low borderline
silene_latifolia_GWHPCBIJ007147 Phenylpropanoid C4H/CYP73A medium borderline
silene_latifolia_GWHPCBIJ011529 Phenylpropanoid C4H/CYP73A medium borderline
silene_latifolia_GWHPCBIJ013589 Phenylpropanoid C4H/CYP73A medium borderline
silene_latifolia_GWHPCBIJ021691 Phenylpropanoid C4H/CYP73A low borderline
silene_latifolia_GWHPCBIJ022421 Phenylpropanoid C4H/CYP73A low borderline
silene_latifolia_GWHPCBIJ026053 Phenylpropanoid C4H/CYP73A low borderline
silene_latifolia_GWHPCBIJ028751 Phenylpropanoid C4H/CYP73A medium borderline
silene_latifolia_GWHPCBIJ029306 Phenylpropanoid C4H/CYP73A low borderline
silene_latifolia_GWHPCBIJ000565 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ000567 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ001780 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ002323 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ004706 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ006051 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ006054 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ006056 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ007822 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ010184 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ010213 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ010215 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ010221 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ010225 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ010437 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011428 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011429 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011430 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011433 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011434 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011435 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ011502 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ012780 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ013186 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ013488 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ016119 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ021695 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ022383 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ022996 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ023543 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ023577 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ024076 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025300 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025459 Phenylpropanoid CAD low borderline