PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

2119
Candidate Protein Records
1810
Pathway-Level Records
4435
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ025460 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025461 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025462 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025463 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ025464 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ027588 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027589 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027593 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027594 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027598 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027599 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ027687 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ028044 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ028045 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ029251 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ030281 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ030781 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ030782 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ030855 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ031512 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ031727 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ032009 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ032852 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ033714 Phenylpropanoid CAD low borderline
silene_latifolia_GWHPCBIJ034264 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ035554 Phenylpropanoid CAD medium pass
silene_latifolia_GWHPCBIJ036060 Phenylpropanoid CAD medium borderline
silene_latifolia_GWHPCBIJ007520 Phenylpropanoid CCR medium borderline
silene_latifolia_GWHPCBIJ012195 Phenylpropanoid CCR medium borderline
silene_latifolia_GWHPCBIJ012196 Phenylpropanoid CCR medium borderline
silene_latifolia_GWHPCBIJ012197 Phenylpropanoid CCR medium borderline
silene_latifolia_GWHPCBIJ015135 Phenylpropanoid CCR medium borderline
silene_latifolia_GWHPCBIJ016292 Phenylpropanoid CCR medium borderline
silene_latifolia_GWHPCBIJ019028 Phenylpropanoid CCR low borderline
silene_latifolia_GWHPCBIJ022526 Phenylpropanoid CCR medium pass
silene_latifolia_GWHPCBIJ023026 Phenylpropanoid CCR medium borderline
silene_latifolia_GWHPCBIJ027076 Phenylpropanoid CCR medium borderline
silene_latifolia_GWHPCBIJ027708 Phenylpropanoid CCR low borderline
silene_latifolia_GWHPCBIJ028814 Phenylpropanoid CCR medium borderline
silene_latifolia_GWHPCBIJ029529 Phenylpropanoid CCR medium borderline
silene_latifolia_GWHPCBIJ030586 Phenylpropanoid CCR medium borderline
silene_latifolia_GWHPCBIJ036460 Phenylpropanoid CCR low borderline
silene_latifolia_GWHPCBIJ036461 Phenylpropanoid CCR low borderline
silene_latifolia_GWHPCBIJ001391 Phenylpropanoid CCoAOMT medium pass
silene_latifolia_GWHPCBIJ007812 Phenylpropanoid CCoAOMT medium pass
silene_latifolia_GWHPCBIJ024988 Phenylpropanoid CCoAOMT medium pass
silene_latifolia_GWHPCBIJ031076 Phenylpropanoid CCoAOMT medium pass
silene_latifolia_GWHPCBIJ036288 Phenylpropanoid CCoAOMT medium pass
silene_latifolia_GWHPCBIJ002189 Phenylpropanoid COMT medium pass
silene_latifolia_GWHPCBIJ002595 Phenylpropanoid COMT low borderline