PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

2119
Candidate Protein Records
1810
Pathway-Level Records
4435
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ028305 Alkaloid COR medium pass
silene_latifolia_GWHPCBIJ029524 Alkaloid COR low borderline
silene_latifolia_GWHPCBIJ030152 Alkaloid COR low borderline
silene_latifolia_GWHPCBIJ006040 Alkaloid CYP719 medium borderline
silene_latifolia_GWHPCBIJ008673 Alkaloid CYP719 medium borderline
silene_latifolia_GWHPCBIJ011900 Alkaloid CYP719 medium borderline
silene_latifolia_GWHPCBIJ011901 Alkaloid CYP719 medium borderline
silene_latifolia_GWHPCBIJ011915 Alkaloid CYP719 medium borderline
silene_latifolia_GWHPCBIJ022687 Alkaloid CYP719 low borderline
silene_latifolia_GWHPCBIJ031409 Alkaloid CYP719 medium borderline
silene_latifolia_GWHPCBIJ022691 Alkaloid CYP80B1 medium borderline
silene_latifolia_GWHPCBIJ031593 Alkaloid CYP80B1 low borderline
silene_latifolia_GWHPCBIJ031944 Alkaloid CYP80B1 medium borderline
silene_latifolia_GWHPCBIJ000656 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ002511 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ002513 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ002823 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ003139 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ004924 Alkaloid G8O/G8H medium pass
silene_latifolia_GWHPCBIJ005301 Alkaloid G8O/G8H low borderline
silene_latifolia_GWHPCBIJ007346 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ008990 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ009506 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ010455 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ010569 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ011493 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ011494 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ011529 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ011531 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ011533 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ012493 Alkaloid G8O/G8H low borderline
silene_latifolia_GWHPCBIJ013574 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ014201 Alkaloid G8O/G8H low borderline
silene_latifolia_GWHPCBIJ016318 Alkaloid G8O/G8H medium pass
silene_latifolia_GWHPCBIJ016657 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ017966 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ017967 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ017968 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ018026 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ018122 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ021305 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ021807 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ022865 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ022893 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ026153 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ026291 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ028020 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ029016 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ029017 Alkaloid G8O/G8H medium borderline
silene_latifolia_GWHPCBIJ029306 Alkaloid G8O/G8H low borderline