PlantSME Plant secondary metabolism enzyme database

Theobroma cacao (theobroma_cacao)

Imported from atlas release summary for Theobroma cacao.

2555
Candidate Protein Records
2109
Pathway-Level Records
5264
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 617 19 BAHD (254) View species results
Alkaloid pathway 471 22 7DLGT (91) View species results
Phenylpropanoid pathway 442 11 POD (197) View species results
Flavonoid pathway 246 9 UFGT (165) View species results
Rosmarinic acid pathway 193 7 C4H (70) View species results
Steroid pathway 140 13 CAS (70) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1997 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Tcac09G0014130.2 Rosmarinic Acid TAT medium pass
Tcac09G0014130.3 Rosmarinic Acid TAT medium pass
Tcac09G0014130.4 Rosmarinic Acid TAT medium pass
Tcac09G0014130.5 Rosmarinic Acid TAT medium pass
Tcac10G0002500.1 Rosmarinic Acid TAT low borderline
Tcac10G0002510.1 Rosmarinic Acid TAT low borderline
Tcac10G0008080.1 Rosmarinic Acid TAT low borderline
Tcac10G0008080.2 Rosmarinic Acid TAT low borderline
Tcac10G0008080.3 Rosmarinic Acid TAT low borderline
Tcac10G0008080.4 Rosmarinic Acid TAT low borderline
Tcac01G0002900.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac01G0034170.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac02G0019820.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac03G0020990.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac03G0023660.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac03G0023670.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac03G0029480.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac05G0007680.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac05G0019830.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac05G0019990.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac05G0019990.2 Steroid BR6OX1/CYP85A1 medium borderline
Tcac05G0020010.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac05G0020030.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac05G0020030.2 Steroid BR6OX1/CYP85A1 medium borderline
Tcac06G0000690.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac08G0000560.1 Steroid BR6OX1/CYP85A1 low borderline
Tcac08G0000560.2 Steroid BR6OX1/CYP85A1 low borderline
Tcac08G0000670.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac08G0001520.1 Steroid BR6OX1/CYP85A1 low borderline
Tcac08G0001520.2 Steroid BR6OX1/CYP85A1 low borderline
Tcac09G0005540.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac09G0022610.1 Steroid BR6OX1/CYP85A1 medium borderline
Tcac01G0006340.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac01G0010840.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac01G0010980.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac01G0024320.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac01G0031200.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac01G0033260.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac01G0033260.2 Steroid BR6OX2/CYP85A2 low borderline
Tcac02G0009360.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac02G0009390.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac02G0009460.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac02G0015460.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac02G0015860.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac02G0017870.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac02G0024140.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac02G0024260.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac02G0029700.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac03G0003050.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac03G0003070.1 Steroid BR6OX2/CYP85A2 low borderline