PlantSME Plant secondary metabolism enzyme database

Theobroma cacao (theobroma_cacao)

Imported from atlas release summary for Theobroma cacao.

2555
Candidate Protein Records
2109
Pathway-Level Records
5264
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 617 19 BAHD (254) View species results
Alkaloid pathway 471 22 7DLGT (91) View species results
Phenylpropanoid pathway 442 11 POD (197) View species results
Flavonoid pathway 246 9 UFGT (165) View species results
Rosmarinic acid pathway 193 7 C4H (70) View species results
Steroid pathway 140 13 CAS (70) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1997 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Tcac03G0003100.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac03G0009860.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac03G0009860.2 Steroid BR6OX2/CYP85A2 low borderline
Tcac03G0013980.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac03G0014020.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac03G0014430.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac03G0019970.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac03G0025750.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac03G0028830.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac04G0001740.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac04G0001770.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac04G0018390.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac04G0018400.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac04G0024250.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac05G0011020.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac05G0014190.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac05G0014500.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac05G0014500.2 Steroid BR6OX2/CYP85A2 low borderline
Tcac05G0014520.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac05G0018360.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac05G0019850.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac05G0019950.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac06G0004820.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac06G0019830.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac07G0001700.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac07G0001710.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac07G0001750.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac07G0001760.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac07G0014900.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac07G0015800.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac07G0015860.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac07G0015870.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac08G0001730.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac08G0003790.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac08G0003890.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac08G0003900.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac08G0005680.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac08G0008980.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac08G0008980.2 Steroid BR6OX2/CYP85A2 low borderline
Tcac08G0009100.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac08G0017600.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac08G0018350.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac09G0007490.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac09G0007490.2 Steroid BR6OX2/CYP85A2 low borderline
Tcac09G0018380.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac09G0019070.1 Steroid BR6OX2/CYP85A2 medium borderline
Tcac09G0023110.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac09G0026460.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac09G0028200.1 Steroid BR6OX2/CYP85A2 low borderline
Tcac09G0030250.1 Steroid BR6OX2/CYP85A2 low borderline