PlantSME Plant secondary metabolism enzyme database

Theobroma cacao (theobroma_cacao)

Imported from atlas release summary for Theobroma cacao.

2555
Candidate Protein Records
2109
Pathway-Level Records
5264
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 617 19 BAHD (254) View species results
Alkaloid pathway 471 22 7DLGT (91) View species results
Phenylpropanoid pathway 442 11 POD (197) View species results
Flavonoid pathway 246 9 UFGT (165) View species results
Rosmarinic acid pathway 193 7 C4H (70) View species results
Steroid pathway 140 13 CAS (70) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1997 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Tcac04G0001570.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0002070.1 Steroid DWF4/CYP90B1 medium borderline
Tcac04G0003360.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0009020.1 Steroid DWF4/CYP90B1 medium borderline
Tcac04G0009980.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0010010.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0010030.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0010040.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0010050.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0010810.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0010820.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0011790.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0019930.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0022780.1 Steroid DWF4/CYP90B1 low borderline
Tcac04G0022780.2 Steroid DWF4/CYP90B1 low borderline
Tcac05G0007670.1 Steroid DWF4/CYP90B1 low borderline
Tcac05G0008230.1 Steroid DWF4/CYP90B1 low borderline
Tcac05G0014460.1 Steroid DWF4/CYP90B1 low borderline
Tcac05G0014460.2 Steroid DWF4/CYP90B1 low borderline
Tcac05G0014480.1 Steroid DWF4/CYP90B1 low borderline
Tcac05G0017940.1 Steroid DWF4/CYP90B1 low borderline
Tcac05G0017940.2 Steroid DWF4/CYP90B1 low borderline
Tcac05G0017940.3 Steroid DWF4/CYP90B1 low borderline
Tcac05G0017940.4 Steroid DWF4/CYP90B1 low borderline
Tcac05G0017940.5 Steroid DWF4/CYP90B1 low borderline
Tcac05G0017940.6 Steroid DWF4/CYP90B1 low borderline
Tcac05G0017940.7 Steroid DWF4/CYP90B1 low borderline
Tcac05G0019880.1 Steroid DWF4/CYP90B1 low borderline
Tcac05G0019910.1 Steroid DWF4/CYP90B1 low borderline
Tcac05G0019940.1 Steroid DWF4/CYP90B1 low borderline
Tcac05G0019970.1 Steroid DWF4/CYP90B1 low borderline
Tcac05G0019980.1 Steroid DWF4/CYP90B1 low borderline
Tcac06G0004790.1 Steroid DWF4/CYP90B1 medium borderline
Tcac06G0004800.1 Steroid DWF4/CYP90B1 medium borderline
Tcac06G0013480.1 Steroid DWF4/CYP90B1 low borderline
Tcac06G0013480.2 Steroid DWF4/CYP90B1 low borderline
Tcac07G0001720.2 Steroid DWF4/CYP90B1 low borderline
Tcac07G0001720.3 Steroid DWF4/CYP90B1 low borderline
Tcac07G0013580.1 Steroid DWF4/CYP90B1 low borderline
Tcac07G0013590.1 Steroid DWF4/CYP90B1 low borderline
Tcac07G0015820.1 Steroid DWF4/CYP90B1 low borderline
Tcac08G0001630.1 Steroid DWF4/CYP90B1 low borderline
Tcac08G0001640.1 Steroid DWF4/CYP90B1 low borderline
Tcac08G0001690.1 Steroid DWF4/CYP90B1 low borderline
Tcac08G0001750.1 Steroid DWF4/CYP90B1 low borderline
Tcac08G0001760.1 Steroid DWF4/CYP90B1 low borderline
Tcac08G0002240.1 Steroid DWF4/CYP90B1 low borderline
Tcac08G0003780.1 Steroid DWF4/CYP90B1 low borderline
Tcac08G0003810.1 Steroid DWF4/CYP90B1 low borderline
Tcac08G0003820.1 Steroid DWF4/CYP90B1 low borderline