PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Protein/Isoform Record Pathway Family Confidence Status
Garb08G0012610 Alkaloid 7DLGT low borderline
Garb08G0012620 Alkaloid 7DLGT low borderline
Garb08G0012630 Alkaloid 7DLGT low borderline
Garb08G0012640 Alkaloid 7DLGT low borderline
Garb08G0013390 Alkaloid 7DLGT low borderline
Garb08G0013800 Alkaloid 7DLGT low borderline
Garb08G0013810 Alkaloid 7DLGT low borderline
Garb08G0013820 Alkaloid 7DLGT medium pass
Garb08G0013830 Alkaloid 7DLGT low borderline
Garb08G0015670 Alkaloid 7DLGT low borderline
Garb08G0018280 Alkaloid 7DLGT low borderline
Garb08G0018290 Alkaloid 7DLGT low borderline
Garb08G0020910 Alkaloid 7DLGT low borderline
Garb08G0021090 Alkaloid 7DLGT medium pass
Garb08G0023450 Alkaloid 7DLGT low borderline
Garb08G0023460 Alkaloid 7DLGT medium pass
Garb08G0023470 Alkaloid 7DLGT low borderline
Garb09G0001680 Alkaloid 7DLGT medium pass
Garb09G0002360 Alkaloid 7DLGT medium pass
Garb09G0009250 Alkaloid 7DLGT medium pass
Garb09G0012450 Alkaloid 7DLGT medium pass
Garb09G0012460 Alkaloid 7DLGT medium pass
Garb09G0018790 Alkaloid 7DLGT high pass
Garb10G0000270 Alkaloid 7DLGT low borderline
Garb10G0023360 Alkaloid 7DLGT medium pass
Garb10G0030470 Alkaloid 7DLGT high pass
Garb10G0034560 Alkaloid 7DLGT high pass
Garb10G0034570 Alkaloid 7DLGT medium pass
Garb10G0034580 Alkaloid 7DLGT high pass
Garb10G0034590 Alkaloid 7DLGT medium pass
Garb10G0034600 Alkaloid 7DLGT medium pass
Garb10G0034610 Alkaloid 7DLGT medium pass
Garb10G0034620 Alkaloid 7DLGT medium pass
Garb10G0034690 Alkaloid 7DLGT low borderline
Garb10G0034700 Alkaloid 7DLGT medium pass
Garb11G0003400 Alkaloid 7DLGT low borderline
Garb11G0013080 Alkaloid 7DLGT low borderline
Garb11G0013090 Alkaloid 7DLGT low borderline
Garb11G0013100 Alkaloid 7DLGT low borderline
Garb11G0013110 Alkaloid 7DLGT low borderline
Garb11G0014140 Alkaloid 7DLGT low borderline
Garb11G0033710 Alkaloid 7DLGT low borderline
Garb12G0002610 Alkaloid 7DLGT low borderline
Garb12G0004240 Alkaloid 7DLGT medium pass
Garb12G0004260 Alkaloid 7DLGT medium pass
Garb12G0004280 Alkaloid 7DLGT low borderline
Garb12G0005350 Alkaloid 7DLGT medium pass
Garb12G0005370 Alkaloid 7DLGT high pass
Garb12G0005380 Alkaloid 7DLGT medium pass
Garb12G0010900 Alkaloid 7DLGT low borderline