PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Garb11G0021190 Terpenoid CYP76 low borderline
Garb11G0021680 Terpenoid CYP76 medium pass
Garb11G0021690 Terpenoid CYP76 medium pass
Garb11G0021700 Terpenoid CYP76 medium borderline
Garb11G0024390 Terpenoid CYP76 medium pass
Garb11G0024410 Terpenoid CYP76 medium pass
Garb11G0024430 Terpenoid CYP76 medium pass
Garb11G0025770 Terpenoid CYP76 medium pass
Garb11G0030990 Terpenoid CYP76 low borderline
Garb12G0006130 Terpenoid CYP76 medium borderline
Garb12G0008300 Terpenoid CYP76 medium borderline
Garb12G0026660 Terpenoid CYP76 medium borderline
Garb12G0026670 Terpenoid CYP76 medium borderline
Garb12G0027800 Terpenoid CYP76 medium pass
Garb13G0002250 Terpenoid CYP76 low borderline
Garb13G0004830 Terpenoid CYP76 low borderline
Garb13G0004890 Terpenoid CYP76 low borderline
Garb13G0010980 Terpenoid CYP76 low borderline
Garb13G0011710 Terpenoid CYP76 medium borderline
Garb13G0012870 Terpenoid CYP76 low borderline
Garb13G0013810 Terpenoid CYP76 medium pass
Garb13G0014480 Terpenoid CYP76 medium borderline
Garb13G0016570 Terpenoid CYP76 medium pass
Garb13G0016600 Terpenoid CYP76 medium borderline
Garb13G0016620 Terpenoid CYP76 medium pass
Garb13G0016630 Terpenoid CYP76 medium borderline
Garb13G0022430 Terpenoid CYP76 medium borderline
Garb13G0022440 Terpenoid CYP76 medium borderline
Garb13G0026220 Terpenoid CYP76 low borderline
Garb13G0026230 Terpenoid CYP76 medium pass
Garb13G0032050 Terpenoid CYP76 medium pass
Garb13G0033360 Terpenoid CYP76 low borderline
Garb13G0033400 Terpenoid CYP76 medium borderline
Garb08G0021930 Terpenoid DXR low borderline
Garb11G0016000 Terpenoid DXR high pass
Garb11G0019640 Terpenoid DXR high pass
Garb03G0016460 Terpenoid DXS medium pass
Garb03G0016500 Terpenoid DXS medium pass
Garb03G0016510 Terpenoid DXS medium pass
Garb05G0011480 Terpenoid DXS medium pass
Garb06G0031520 Terpenoid DXS medium pass
Garb10G0024210 Terpenoid DXS medium pass
Garb12G0010040 Terpenoid DXS low borderline
Garb01G0033780 Terpenoid FPPS low borderline
Garb06G0007100 Terpenoid FPPS medium pass
Garb07G0006930 Terpenoid FPPS medium pass
Garb10G0007950 Terpenoid FPPS medium pass
Garb10G0012160 Terpenoid FPPS medium borderline
Garb11G0005240 Terpenoid FPPS medium pass
Garb11G0030400 Terpenoid FPPS medium pass