PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Garb13G0002860 Alkaloid 7DLH medium borderline
Garb13G0010980 Alkaloid 7DLH medium borderline
Garb13G0011050 Alkaloid 7DLH medium borderline
Garb13G0011090 Alkaloid 7DLH medium borderline
Garb13G0011110 Alkaloid 7DLH medium borderline
Garb13G0011590 Alkaloid 7DLH medium borderline
Garb13G0011610 Alkaloid 7DLH medium borderline
Garb13G0011620 Alkaloid 7DLH medium borderline
Garb13G0020290 Alkaloid 7DLH medium borderline
Garb13G0025240 Alkaloid 7DLH medium borderline
Garb13G0033360 Alkaloid 7DLH medium borderline
Garb01G0027320 Alkaloid 8HGO medium borderline
Garb01G0035320 Alkaloid 8HGO medium borderline
Garb02G0001820 Alkaloid 8HGO medium borderline
Garb03G0013290 Alkaloid 8HGO medium borderline
Garb04G0014590 Alkaloid 8HGO medium borderline
Garb04G0014600 Alkaloid 8HGO medium borderline
Garb05G0005360 Alkaloid 8HGO medium borderline
Garb05G0005370 Alkaloid 8HGO medium pass
Garb05G0005380 Alkaloid 8HGO medium borderline
Garb05G0005410 Alkaloid 8HGO medium borderline
Garb05G0010270 Alkaloid 8HGO medium borderline
Garb07G0005440 Alkaloid 8HGO medium borderline
Garb08G0022660 Alkaloid 8HGO medium borderline
Garb08G0022670 Alkaloid 8HGO medium borderline
Garb12G0015760 Alkaloid 8HGO medium borderline
Garb12G0026040 Alkaloid 8HGO medium borderline
Garb13G0013250 Alkaloid 8HGO medium borderline
Garb13G0013260 Alkaloid 8HGO medium borderline
Garb05G0001920 Alkaloid ADC medium pass
Garb08G0014550 Alkaloid ADC low borderline
Garb12G0018750 Alkaloid ADC medium pass
Garb13G0018140 Alkaloid ADC medium pass
Garb01G0009780 Alkaloid BBE low borderline
Garb02G0000100 Alkaloid BBE low borderline
Garb03G0000870 Alkaloid BBE medium borderline
Garb03G0019360 Alkaloid BBE medium borderline
Garb03G0025730 Alkaloid BBE medium borderline
Garb05G0017880 Alkaloid BBE medium borderline
Garb06G0024290 Alkaloid BBE medium borderline
Garb06G0024310 Alkaloid BBE medium borderline
Garb06G0033690 Alkaloid BBE medium borderline
Garb06G0033700 Alkaloid BBE medium borderline
Garb06G0033710 Alkaloid BBE medium borderline
Garb06G0033720 Alkaloid BBE medium borderline
Garb06G0033730 Alkaloid BBE medium borderline
Garb07G0027870 Alkaloid BBE medium borderline
Garb08G0005530 Alkaloid BBE medium borderline
Garb08G0021780 Alkaloid BBE medium borderline
Garb08G0021790 Alkaloid BBE medium borderline