PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Garb10G0027050 Rosmarinic Acid C4H low borderline
Garb10G0029120 Rosmarinic Acid C4H low borderline
Garb10G0030680 Rosmarinic Acid C4H low borderline
Garb10G0032060 Rosmarinic Acid C4H low borderline
Garb10G0034800 Rosmarinic Acid C4H low borderline
Garb10G0034810 Rosmarinic Acid C4H medium pass
Garb10G0036100 Rosmarinic Acid C4H low borderline
Garb10G0036500 Rosmarinic Acid C4H medium pass
Garb10G0038730 Rosmarinic Acid C4H low borderline
Garb11G0000840 Rosmarinic Acid C4H low borderline
Garb11G0001450 Rosmarinic Acid C4H low borderline
Garb11G0001600 Rosmarinic Acid C4H low borderline
Garb11G0001610 Rosmarinic Acid C4H medium pass
Garb11G0003650 Rosmarinic Acid C4H low borderline
Garb11G0003840 Rosmarinic Acid C4H low borderline
Garb11G0003870 Rosmarinic Acid C4H low borderline
Garb11G0010050 Rosmarinic Acid C4H low borderline
Garb11G0016740 Rosmarinic Acid C4H low borderline
Garb11G0016750 Rosmarinic Acid C4H medium pass
Garb11G0016760 Rosmarinic Acid C4H medium pass
Garb11G0018250 Rosmarinic Acid C4H low borderline
Garb11G0019100 Rosmarinic Acid C4H medium pass
Garb11G0021680 Rosmarinic Acid C4H low borderline
Garb11G0021700 Rosmarinic Acid C4H low borderline
Garb11G0024390 Rosmarinic Acid C4H medium pass
Garb11G0024410 Rosmarinic Acid C4H low borderline
Garb11G0024430 Rosmarinic Acid C4H medium pass
Garb12G0000130 Rosmarinic Acid C4H low borderline
Garb12G0006130 Rosmarinic Acid C4H low borderline
Garb12G0008290 Rosmarinic Acid C4H low borderline
Garb12G0008300 Rosmarinic Acid C4H low borderline
Garb12G0014580 Rosmarinic Acid C4H low borderline
Garb12G0020300 Rosmarinic Acid C4H low borderline
Garb12G0024660 Rosmarinic Acid C4H low borderline
Garb12G0024760 Rosmarinic Acid C4H low borderline
Garb12G0024770 Rosmarinic Acid C4H low borderline
Garb12G0024780 Rosmarinic Acid C4H low borderline
Garb12G0026610 Rosmarinic Acid C4H low borderline
Garb12G0026660 Rosmarinic Acid C4H low borderline
Garb12G0026670 Rosmarinic Acid C4H low borderline
Garb12G0027800 Rosmarinic Acid C4H medium pass
Garb12G0031160 Rosmarinic Acid C4H low borderline
Garb13G0002170 Rosmarinic Acid C4H medium pass
Garb13G0002250 Rosmarinic Acid C4H low borderline
Garb13G0002850 Rosmarinic Acid C4H low borderline
Garb13G0002860 Rosmarinic Acid C4H low borderline
Garb13G0004010 Rosmarinic Acid C4H low borderline
Garb13G0004830 Rosmarinic Acid C4H low borderline
Garb13G0004890 Rosmarinic Acid C4H low borderline
Garb13G0004900 Rosmarinic Acid C4H low borderline