PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Garb13G0004920 Rosmarinic Acid C4H low borderline
Garb13G0004930 Rosmarinic Acid C4H low borderline
Garb13G0011030 Rosmarinic Acid C4H low borderline
Garb13G0011050 Rosmarinic Acid C4H low borderline
Garb13G0011090 Rosmarinic Acid C4H low borderline
Garb13G0011110 Rosmarinic Acid C4H low borderline
Garb13G0011590 Rosmarinic Acid C4H low borderline
Garb13G0011610 Rosmarinic Acid C4H low borderline
Garb13G0011620 Rosmarinic Acid C4H low borderline
Garb13G0011710 Rosmarinic Acid C4H low borderline
Garb13G0012670 Rosmarinic Acid C4H low borderline
Garb13G0012870 Rosmarinic Acid C4H low borderline
Garb13G0013810 Rosmarinic Acid C4H low borderline
Garb13G0014480 Rosmarinic Acid C4H medium pass
Garb13G0016570 Rosmarinic Acid C4H low borderline
Garb13G0016580 Rosmarinic Acid C4H medium pass
Garb13G0016600 Rosmarinic Acid C4H medium pass
Garb13G0016630 Rosmarinic Acid C4H medium pass
Garb13G0017280 Rosmarinic Acid C4H low borderline
Garb13G0017840 Rosmarinic Acid C4H low borderline
Garb13G0019170 Rosmarinic Acid C4H medium pass
Garb13G0020290 Rosmarinic Acid C4H low borderline
Garb13G0020360 Rosmarinic Acid C4H low borderline
Garb13G0022430 Rosmarinic Acid C4H low borderline
Garb13G0022440 Rosmarinic Acid C4H low borderline
Garb13G0025240 Rosmarinic Acid C4H low borderline
Garb13G0025740 Rosmarinic Acid C4H low borderline
Garb13G0029680 Rosmarinic Acid C4H low borderline
Garb13G0033360 Rosmarinic Acid C4H low borderline
Garb13G0033400 Rosmarinic Acid C4H low borderline
Garb01G0016250 Rosmarinic Acid CPR medium pass
Garb02G0014200 Rosmarinic Acid CPR medium pass
Garb03G0016580 Rosmarinic Acid CPR medium pass
Garb07G0033500 Rosmarinic Acid CPR medium pass
Garb08G0024730 Rosmarinic Acid CPR medium pass
Garb10G0010860 Rosmarinic Acid CPR medium pass
Garb10G0039170 Rosmarinic Acid CPR medium pass
Garb01G0011620 Rosmarinic Acid HPPR medium pass
Garb07G0011650 Rosmarinic Acid HPPR low borderline
Garb07G0011660 Rosmarinic Acid HPPR medium pass
Garb10G0018230 Rosmarinic Acid HPPR medium pass
Garb11G0023350 Rosmarinic Acid HPPR medium pass
Garb13G0001400 Rosmarinic Acid HPPR medium pass
Garb01G0010450 Rosmarinic Acid PAL high pass
Garb02G0012800 Rosmarinic Acid PAL high pass
Garb03G0026610 Rosmarinic Acid PAL high pass
Garb04G0021440 Rosmarinic Acid PAL high pass
Garb04G0031750 Rosmarinic Acid PAL high pass
Garb10G0037580 Rosmarinic Acid PAL high pass
Garb12G0009070 Rosmarinic Acid PAL high pass