PlantSME Plant secondary metabolism enzyme database

Oryza nivara (oryza_nivara)

Imported from atlas release summary for Oryza nivara.

1919
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 573 19 BAHD (237) View species results
Alkaloid pathway 445 24 7DLGT (78) View species results
Phenylpropanoid pathway 308 12 POD (101) View species results
Flavonoid pathway 306 13 UFGT (191) View species results
Rosmarinic acid pathway 150 7 C4H (77) View species results
Steroid pathway 137 13 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 401 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
ONIVA03G23130.1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
ONIVA03G25820.1 Terpenoid BAHD medium pass BAHD__00079__sp_Q9LIE4_ZDHC8_ARATH
ONIVA03G26780.1 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
ONIVA03G26790.1 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
ONIVA03G29280.1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
ONIVA03G30840.1 Terpenoid BAHD low borderline BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
ONIVA03G31050.1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
ONIVA03G34440.1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
ONIVA03G34440.2 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
ONIVA03G34440.3 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
ONIVA03G34640.1 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
ONIVA03G34640.2 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
ONIVA03G39360.1 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
ONIVA03G41780.1 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
ONIVA04G02180.1 Terpenoid BAHD medium pass BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
ONIVA04G02220.1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
ONIVA04G02220.2 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
ONIVA04G02430.1 Terpenoid BAHD medium pass BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
ONIVA04G02880.1 Terpenoid BAHD medium pass BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
ONIVA04G06290.1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
ONIVA04G08870.1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
ONIVA04G16010.1 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
ONIVA04G16020.1 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
ONIVA04G16460.1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
ONIVA04G20160.1 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
ONIVA04G20160.10 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
ONIVA04G20160.11 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
ONIVA04G20160.2 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
ONIVA04G20160.3 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
ONIVA04G20160.4 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
ONIVA04G20160.5 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
ONIVA04G20160.6 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
ONIVA04G20160.7 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
ONIVA04G20160.8 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
ONIVA04G20160.9 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
ONIVA04G21060.1 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
ONIVA04G22290.1 Terpenoid BAHD medium pass BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
ONIVA04G23650.1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
ONIVA04G23950.1 Terpenoid BAHD low borderline BAHD__00012__sp_A1XWY7_CFAT_PETHY
ONIVA04G23950.2 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
ONIVA04G24060.1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
ONIVA04G24310.1 Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
ONIVA04G24950.1 Terpenoid BAHD low borderline BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
ONIVA04G27150.1 Terpenoid BAHD low borderline BAHD__00033__sp_P0DXG0_AT_STRYX
ONIVA04G27160.1 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
ONIVA04G27930.1 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
ONIVA04G27930.2 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
ONIVA04G27930.3 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
ONIVA04G27930.4 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
ONIVA04G27930.5 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH