PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold7080438100 Alkaloid CODM/T6ODM medium borderline
Csimscaffold7120439470 Alkaloid CODM/T6ODM medium borderline
Csimscaffold7470448650 Alkaloid CODM/T6ODM medium borderline
Csimscaffold7680453940 Alkaloid CODM/T6ODM medium borderline
Csimscaffold80462560 Alkaloid CODM/T6ODM medium borderline
Csimscaffold8060464760 Alkaloid CODM/T6ODM medium borderline
Csimscaffold8240468930 Alkaloid CODM/T6ODM medium borderline
Csimscaffold8240468940 Alkaloid CODM/T6ODM low borderline
Csimscaffold830470360 Alkaloid CODM/T6ODM medium borderline
Csimscaffold8530476090 Alkaloid CODM/T6ODM medium borderline
Csimscaffold870480000 Alkaloid CODM/T6ODM medium borderline
Csimscaffold890484680 Alkaloid CODM/T6ODM medium borderline
Csimscaffold9630503870 Alkaloid CODM/T6ODM medium borderline
Csimscaffold9910511060 Alkaloid CODM/T6ODM medium borderline
Csimscaffold1180041590 Alkaloid COR medium pass
Csimscaffold1180041610 Alkaloid COR medium pass
Csimscaffold1180041620 Alkaloid COR medium pass
Csimscaffold13100067980 Alkaloid COR medium pass
Csimscaffold13100067990 Alkaloid COR low borderline
Csimscaffold13430073740 Alkaloid COR low borderline
Csimscaffold15500113400 Alkaloid COR medium pass
Csimscaffold17470142130 Alkaloid COR medium pass
Csimscaffold18170151790 Alkaloid COR medium pass
Csimscaffold24140225210 Alkaloid COR medium pass
Csimscaffold24140225230 Alkaloid COR medium pass
Csimscaffold24360227080 Alkaloid COR medium pass
Csimscaffold24360227090 Alkaloid COR medium pass
Csimscaffold24360227100 Alkaloid COR medium pass
Csimscaffold2530235590 Alkaloid COR medium pass
Csimscaffold33630300650 Alkaloid COR medium pass
Csimscaffold33630300660 Alkaloid COR medium pass
Csimscaffold33630300670 Alkaloid COR medium pass
Csimscaffold33630300680 Alkaloid COR medium pass
Csimscaffold480368150 Alkaloid COR medium pass
Csimscaffold5780399380 Alkaloid COR medium pass
Csimscaffold7570451100 Alkaloid COR medium pass
Csimscaffold7570451120 Alkaloid COR medium pass
Csimscaffold7570451130 Alkaloid COR medium pass
Csimscaffold9840509150 Alkaloid COR medium pass
Csimscaffold13180069020 Alkaloid CYP719 medium borderline
Csimscaffold15350111040 Alkaloid CYP719 medium borderline
Csimscaffold1660129890 Alkaloid CYP719 medium borderline
Csimscaffold21320194860 Alkaloid CYP719 medium borderline
Csimscaffold4240345740 Alkaloid CYP719 medium borderline
Csimscaffold4420354370 Alkaloid CYP719 medium borderline
Csimscaffold4430354570 Alkaloid CYP719 medium borderline
Csimscaffold4430354590 Alkaloid CYP719 medium borderline
Csimscaffold6230412710 Alkaloid CYP719 medium borderline
Csimscaffold70435260 Alkaloid CYP719 medium borderline
Csimscaffold7220442050 Alkaloid CYP719 medium borderline