PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold4430354630 Alkaloid G8O/G8H medium borderline
Csimscaffold4770366530 Alkaloid G8O/G8H medium borderline
Csimscaffold5610394540 Alkaloid G8O/G8H medium borderline
Csimscaffold6120409590 Alkaloid G8O/G8H medium borderline
Csimscaffold6120409600 Alkaloid G8O/G8H medium borderline
Csimscaffold6120409650 Alkaloid G8O/G8H medium borderline
Csimscaffold6570422010 Alkaloid G8O/G8H low borderline
Csimscaffold6570422020 Alkaloid G8O/G8H low borderline
Csimscaffold6570422160 Alkaloid G8O/G8H low borderline
Csimscaffold770454430 Alkaloid G8O/G8H low borderline
Csimscaffold770454470 Alkaloid G8O/G8H medium borderline
Csimscaffold7840458250 Alkaloid G8O/G8H medium borderline
Csimscaffold7980461370 Alkaloid G8O/G8H medium pass
Csimscaffold80462650 Alkaloid G8O/G8H medium pass
Csimscaffold830470550 Alkaloid G8O/G8H medium borderline
Csimscaffold9040489540 Alkaloid G8O/G8H low borderline
Csimscaffold9040489560 Alkaloid G8O/G8H low borderline
Csimscaffold9280495700 Alkaloid G8O/G8H medium borderline
Csimscaffold9300496340 Alkaloid G8O/G8H medium borderline
Csimscaffold9400498210 Alkaloid G8O/G8H medium borderline
Csimscaffold9570502350 Alkaloid G8O/G8H low borderline
Csimscaffold9810508460 Alkaloid G8O/G8H low borderline
Csimscaffold1030008430 Alkaloid GES medium pass
Csimscaffold1030008440 Alkaloid GES medium pass
Csimscaffold1030008480 Alkaloid GES medium pass
Csimscaffold1030008490 Alkaloid GES low borderline
Csimscaffold1030008500 Alkaloid GES medium pass
Csimscaffold1080019180 Alkaloid GES medium pass
Csimscaffold10950022160 Alkaloid GES medium pass
Csimscaffold13230070140 Alkaloid GES medium pass
Csimscaffold13230070150 Alkaloid GES medium pass
Csimscaffold13650079230 Alkaloid GES medium pass
Csimscaffold1420090420 Alkaloid GES medium pass
Csimscaffold15660115630 Alkaloid GES medium pass
Csimscaffold15860118630 Alkaloid GES low borderline
Csimscaffold16480127900 Alkaloid GES medium pass
Csimscaffold17000136180 Alkaloid GES low borderline
Csimscaffold21500196580 Alkaloid GES medium pass
Csimscaffold21500196590 Alkaloid GES medium pass
Csimscaffold21920200460 Alkaloid GES medium pass
Csimscaffold23430217340 Alkaloid GES medium pass
Csimscaffold2440227820 Alkaloid GES medium pass
Csimscaffold2440227830 Alkaloid GES medium pass
Csimscaffold2440227840 Alkaloid GES medium pass
Csimscaffold2440227850 Alkaloid GES medium pass
Csimscaffold27170253480 Alkaloid GES medium pass
Csimscaffold29150270040 Alkaloid GES medium pass
Csimscaffold34120303760 Alkaloid GES low borderline
Csimscaffold34120303770 Alkaloid GES medium pass
Csimscaffold3520309730 Alkaloid GES medium pass