PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold24160225340 Alkaloid GS high pass
Csimscaffold24160225380 Alkaloid GS high pass
Csimscaffold2470230450 Alkaloid GS low borderline
Csimscaffold2510233970 Alkaloid GS low borderline
Csimscaffold2590240810 Alkaloid GS high pass
Csimscaffold2740255390 Alkaloid GS high pass
Csimscaffold2740255400 Alkaloid GS high pass
Csimscaffold290267980 Alkaloid GS high pass
Csimscaffold290268000 Alkaloid GS high pass
Csimscaffold29250270620 Alkaloid GS high pass
Csimscaffold29780274040 Alkaloid GS low borderline
Csimscaffold310283690 Alkaloid GS high pass
Csimscaffold37810322480 Alkaloid GS high pass
Csimscaffold40150335480 Alkaloid GS high pass
Csimscaffold4060337430 Alkaloid GS low borderline
Csimscaffold4190343350 Alkaloid GS high pass
Csimscaffold4860369840 Alkaloid GS low borderline
Csimscaffold4970373420 Alkaloid GS low borderline
Csimscaffold5570393090 Alkaloid GS high pass
Csimscaffold5570393100 Alkaloid GS high pass
Csimscaffold5570393120 Alkaloid GS high pass
Csimscaffold5570393130 Alkaloid GS medium pass
Csimscaffold5570393140 Alkaloid GS medium pass
Csimscaffold5570393160 Alkaloid GS high pass
Csimscaffold6830430120 Alkaloid GS medium pass
Csimscaffold6830430150 Alkaloid GS high pass
Csimscaffold6830430160 Alkaloid GS high pass
Csimscaffold6830430170 Alkaloid GS high pass
Csimscaffold6830430180 Alkaloid GS medium pass
Csimscaffold7090438210 Alkaloid GS low borderline
Csimscaffold720440990 Alkaloid GS low borderline
Csimscaffold7580451330 Alkaloid GS high pass
Csimscaffold8750481290 Alkaloid GS low borderline
Csimscaffold9620503600 Alkaloid GS medium pass
Csimscaffold9850509370 Alkaloid GS low borderline
Csimscaffold9860509480 Alkaloid GS high pass
Csimscaffold9860509510 Alkaloid GS high pass
Csimscaffold9860509540 Alkaloid GS medium pass
Csimscaffold9860509560 Alkaloid GS high pass
Csimscaffold10190005880 Alkaloid H6H low borderline
Csimscaffold1040011140 Alkaloid H6H low borderline
Csimscaffold1070017020 Alkaloid H6H medium borderline
Csimscaffold1120027700 Alkaloid H6H medium pass
Csimscaffold11750040490 Alkaloid H6H low borderline
Csimscaffold1180041460 Alkaloid H6H low borderline
Csimscaffold14320092900 Alkaloid H6H low borderline
Csimscaffold14560097000 Alkaloid H6H low borderline
Csimscaffold14720099910 Alkaloid H6H low borderline
Csimscaffold14990103810 Alkaloid H6H medium borderline
Csimscaffold1510107070 Alkaloid H6H low borderline