PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold5480390720 Phenylpropanoid CCR medium borderline
Csimscaffold5600394240 Phenylpropanoid CCR medium pass
Csimscaffold570396820 Phenylpropanoid CCR medium pass
Csimscaffold6680424920 Phenylpropanoid CCR medium borderline
Csimscaffold6680424950 Phenylpropanoid CCR medium borderline
Csimscaffold6680424960 Phenylpropanoid CCR medium borderline
Csimscaffold6680424970 Phenylpropanoid CCR medium borderline
Csimscaffold6680424980 Phenylpropanoid CCR medium borderline
Csimscaffold6680424990 Phenylpropanoid CCR medium borderline
Csimscaffold6680425000 Phenylpropanoid CCR medium borderline
Csimscaffold6680425010 Phenylpropanoid CCR medium borderline
Csimscaffold6710426360 Phenylpropanoid CCR medium borderline
Csimscaffold9790507630 Phenylpropanoid CCR medium borderline
Csimscaffold11550035210 Phenylpropanoid CCoAOMT medium pass
Csimscaffold11550035220 Phenylpropanoid CCoAOMT medium pass
Csimscaffold11550035230 Phenylpropanoid CCoAOMT medium pass
Csimscaffold11550035240 Phenylpropanoid CCoAOMT medium pass
Csimscaffold11720039460 Phenylpropanoid CCoAOMT medium pass
Csimscaffold11720039480 Phenylpropanoid CCoAOMT medium pass
Csimscaffold11860043150 Phenylpropanoid CCoAOMT medium pass
Csimscaffold13300071410 Phenylpropanoid CCoAOMT low borderline
Csimscaffold1350075370 Phenylpropanoid CCoAOMT medium pass
Csimscaffold1530110280 Phenylpropanoid CCoAOMT medium pass
Csimscaffold16010121440 Phenylpropanoid CCoAOMT medium pass
Csimscaffold16010121450 Phenylpropanoid CCoAOMT medium pass
Csimscaffold16010121460 Phenylpropanoid CCoAOMT medium pass
Csimscaffold16010121480 Phenylpropanoid CCoAOMT low borderline
Csimscaffold16910134260 Phenylpropanoid CCoAOMT low borderline
Csimscaffold19530169420 Phenylpropanoid CCoAOMT medium pass
Csimscaffold2160197250 Phenylpropanoid CCoAOMT medium pass
Csimscaffold22910210970 Phenylpropanoid CCoAOMT medium pass
Csimscaffold34430305180 Phenylpropanoid CCoAOMT medium pass
Csimscaffold5460389990 Phenylpropanoid CCoAOMT medium pass
Csimscaffold8240468910 Phenylpropanoid CCoAOMT medium pass
Csimscaffold9850509160 Phenylpropanoid CCoAOMT medium pass
Csimscaffold9960511850 Phenylpropanoid CCoAOMT medium pass
Csimscaffold1000002050 Phenylpropanoid COMT medium pass
Csimscaffold10000550 Phenylpropanoid COMT medium pass
Csimscaffold10640015950 Phenylpropanoid COMT medium pass
Csimscaffold10650016150 Phenylpropanoid COMT medium pass
Csimscaffold10650016170 Phenylpropanoid COMT medium pass
Csimscaffold10650016190 Phenylpropanoid COMT medium pass
Csimscaffold10970022530 Phenylpropanoid COMT medium pass
Csimscaffold11660037760 Phenylpropanoid COMT medium pass
Csimscaffold12840061840 Phenylpropanoid COMT medium pass
Csimscaffold13150068600 Phenylpropanoid COMT medium pass
Csimscaffold1350075170 Phenylpropanoid COMT low borderline
Csimscaffold13550076550 Phenylpropanoid COMT low borderline
Csimscaffold14020087800 Phenylpropanoid COMT medium pass
Csimscaffold14840101710 Phenylpropanoid COMT medium pass