PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
Csimscaffold4260346580 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold4310349100 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold4950372650 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold5630394970 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold600406350 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411560 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411580 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411590 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411630 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411640 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411650 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold6410417700 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold680428810 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold7020436970 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold7140439770 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold780457150 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold7980461530 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold8100465830 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold8130466220 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold8130466250 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold11150026570 Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold120046270 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold13450074310 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold13550076660 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold15030105770 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold16710131660 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold16710131680 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold17000136150 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold17000136160 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold17750145330 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold17750145360 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold2040181750 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold2040181770 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold21130192860 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold21760198910 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold21760198940 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold22300205190 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold22870210400 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold23330216350 Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold28280263120 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold28280263130 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold29450271940 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold29810274670 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold29980275430 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold3200290810 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold35960313300 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold35960313310 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold36260315370 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Csimscaffold39250329920 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH