PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold21080192190 Alkaloid ADC medium pass
Csimscaffold27600257520 Alkaloid ADC medium pass
Csimscaffold33300298840 Alkaloid ADC medium pass
Csimscaffold34760306690 Alkaloid ADC medium pass
Csimscaffold36940318450 Alkaloid ADC medium pass
Csimscaffold4000334750 Alkaloid ADC medium pass
Csimscaffold6790428560 Alkaloid ADC medium pass
Csimscaffold7620452550 Alkaloid ADC medium pass
Csimscaffold780457410 Alkaloid ADC medium pass
Csimscaffold8090465280 Alkaloid ADC low borderline
Csimscaffold8490474340 Alkaloid ADC medium pass
Csimscaffold9190493120 Alkaloid ADC medium pass
Csimscaffold9190493130 Alkaloid ADC medium pass
Csimscaffold11690038580 Alkaloid BBE medium borderline
Csimscaffold12600057870 Alkaloid BBE low borderline
Csimscaffold12900063290 Alkaloid BBE low borderline
Csimscaffold12900063300 Alkaloid BBE medium borderline
Csimscaffold12900063310 Alkaloid BBE medium borderline
Csimscaffold15350110970 Alkaloid BBE medium borderline
Csimscaffold16360126470 Alkaloid BBE medium borderline
Csimscaffold200175410 Alkaloid BBE medium borderline
Csimscaffold2210203010 Alkaloid BBE medium borderline
Csimscaffold26720249080 Alkaloid BBE medium borderline
Csimscaffold31910289790 Alkaloid BBE medium borderline
Csimscaffold31910289800 Alkaloid BBE medium borderline
Csimscaffold3370301100 Alkaloid BBE medium borderline
Csimscaffold3370301110 Alkaloid BBE medium borderline
Csimscaffold4980373970 Alkaloid BBE low borderline
Csimscaffold5680396070 Alkaloid BBE medium borderline
Csimscaffold6520420730 Alkaloid BBE medium borderline
Csimscaffold7920460290 Alkaloid BBE medium borderline
Csimscaffold7920460300 Alkaloid BBE medium borderline
Csimscaffold9320496700 Alkaloid BBE medium borderline
Csimscaffold9320496710 Alkaloid BBE medium borderline
Csimscaffold9320496730 Alkaloid BBE medium borderline
Csimscaffold9320496740 Alkaloid BBE medium borderline
Csimscaffold9320496750 Alkaloid BBE medium borderline
Csimscaffold9320496760 Alkaloid BBE medium borderline
Csimscaffold9790507660 Alkaloid BBE medium borderline
Csimscaffold1820152420 Alkaloid CNMT low borderline
Csimscaffold18290153510 Alkaloid CNMT low borderline
Csimscaffold260242170 Alkaloid CNMT low borderline
Csimscaffold2870265990 Alkaloid CNMT low borderline
Csimscaffold3370300900 Alkaloid CNMT low borderline
Csimscaffold340302480 Alkaloid CNMT medium borderline
Csimscaffold4150342050 Alkaloid CNMT medium pass
Csimscaffold11560035470 Alkaloid CODM/T6ODM medium borderline
Csimscaffold11660037800 Alkaloid CODM/T6ODM medium borderline
Csimscaffold13980085800 Alkaloid CODM/T6ODM medium borderline
Csimscaffold1430092570 Alkaloid CODM/T6ODM medium borderline