PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold14000087630 Rosmarinic Acid RAS medium pass
Csimscaffold14110089100 Rosmarinic Acid RAS medium pass
Csimscaffold14200090770 Rosmarinic Acid RAS low borderline
Csimscaffold15130107720 Rosmarinic Acid RAS low borderline
Csimscaffold1740141150 Rosmarinic Acid RAS medium pass
Csimscaffold1830153550 Rosmarinic Acid RAS medium pass
Csimscaffold1830153570 Rosmarinic Acid RAS medium pass
Csimscaffold1830153590 Rosmarinic Acid RAS medium pass
Csimscaffold1830153600 Rosmarinic Acid RAS medium pass
Csimscaffold18960161670 Rosmarinic Acid RAS low borderline
Csimscaffold18960161680 Rosmarinic Acid RAS low borderline
Csimscaffold19370167390 Rosmarinic Acid RAS low borderline
Csimscaffold19970174450 Rosmarinic Acid RAS low borderline
Csimscaffold2100191130 Rosmarinic Acid RAS low borderline
Csimscaffold2100191150 Rosmarinic Acid RAS medium pass
Csimscaffold21330194940 Rosmarinic Acid RAS medium pass
Csimscaffold21470196180 Rosmarinic Acid RAS medium pass
Csimscaffold22080202710 Rosmarinic Acid RAS medium pass
Csimscaffold23010213220 Rosmarinic Acid RAS medium pass
Csimscaffold23010213230 Rosmarinic Acid RAS medium pass
Csimscaffold2580240040 Rosmarinic Acid RAS medium pass
Csimscaffold25950241240 Rosmarinic Acid RAS low borderline
Csimscaffold2750256580 Rosmarinic Acid RAS low borderline
Csimscaffold2930271110 Rosmarinic Acid RAS low borderline
Csimscaffold30120278360 Rosmarinic Acid RAS low borderline
Csimscaffold32720294950 Rosmarinic Acid RAS low borderline
Csimscaffold3310297390 Rosmarinic Acid RAS medium pass
Csimscaffold3500308820 Rosmarinic Acid RAS medium pass
Csimscaffold37880322620 Rosmarinic Acid RAS medium pass
Csimscaffold4030336140 Rosmarinic Acid RAS low borderline
Csimscaffold4340350210 Rosmarinic Acid RAS low borderline
Csimscaffold4440355190 Rosmarinic Acid RAS low borderline
Csimscaffold4570359820 Rosmarinic Acid RAS medium pass
Csimscaffold4900371390 Rosmarinic Acid RAS low borderline
Csimscaffold5220382530 Rosmarinic Acid RAS low borderline
Csimscaffold5220382540 Rosmarinic Acid RAS medium pass
Csimscaffold6160410620 Rosmarinic Acid RAS low borderline
Csimscaffold6160410630 Rosmarinic Acid RAS medium pass
Csimscaffold7500449700 Rosmarinic Acid RAS low borderline
Csimscaffold8020463810 Rosmarinic Acid RAS medium pass
Csimscaffold8170467260 Rosmarinic Acid RAS medium pass
Csimscaffold850474710 Rosmarinic Acid RAS medium pass
Csimscaffold1040010980 Rosmarinic Acid TAT medium pass
Csimscaffold1040010990 Rosmarinic Acid TAT medium pass
Csimscaffold1140031980 Rosmarinic Acid TAT medium pass
Csimscaffold1170038800 Rosmarinic Acid TAT low borderline
Csimscaffold1510106650 Rosmarinic Acid TAT medium pass
Csimscaffold1840154850 Rosmarinic Acid TAT medium pass
Csimscaffold20900189640 Rosmarinic Acid TAT medium pass
Csimscaffold24900232030 Rosmarinic Acid TAT medium pass