PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Garb07G0008610 Steroid SMO1/SMO2 medium pass
Garb07G0028250 Steroid SMO1/SMO2 low borderline
Garb08G0018160 Steroid SMO1/SMO2 medium pass
Garb11G0021620 Steroid SMO1/SMO2 medium pass
Garb12G0006570 Steroid SMO1/SMO2 medium pass
Garb12G0006580 Steroid SMO1/SMO2 medium pass
Garb12G0006590 Steroid SMO1/SMO2 medium pass
Garb01G0009280 Steroid SMT1/SMT2/SMT3 medium pass
Garb01G0016030 Steroid SMT1/SMT2/SMT3 medium pass
Garb01G0023660 Steroid SMT1/SMT2/SMT3 medium pass
Garb02G0009180 Steroid SMT1/SMT2/SMT3 medium pass
Garb03G0005200 Steroid SMT1/SMT2/SMT3 medium pass
Garb03G0010470 Steroid SMT1/SMT2/SMT3 medium pass
Garb03G0013190 Steroid SMT1/SMT2/SMT3 medium pass
Garb03G0023320 Steroid SMT1/SMT2/SMT3 medium pass
Garb03G0024580 Steroid SMT1/SMT2/SMT3 low borderline
Garb04G0012600 Steroid SMT1/SMT2/SMT3 medium pass
Garb05G0009670 Steroid SMT1/SMT2/SMT3 medium pass
Garb05G0017070 Steroid SMT1/SMT2/SMT3 medium pass
Garb06G0007450 Steroid SMT1/SMT2/SMT3 medium pass
Garb06G0011190 Steroid SMT1/SMT2/SMT3 medium pass
Garb06G0019550 Steroid SMT1/SMT2/SMT3 low borderline
Garb06G0029830 Steroid SMT1/SMT2/SMT3 medium pass
Garb06G0032570 Steroid SMT1/SMT2/SMT3 low borderline
Garb07G0012350 Steroid SMT1/SMT2/SMT3 low borderline
Garb07G0022190 Steroid SMT1/SMT2/SMT3 low borderline
Garb07G0025350 Steroid SMT1/SMT2/SMT3 low borderline
Garb07G0025360 Steroid SMT1/SMT2/SMT3 low borderline
Garb07G0028900 Steroid SMT1/SMT2/SMT3 low borderline
Garb08G0000170 Steroid SMT1/SMT2/SMT3 medium pass
Garb08G0003370 Steroid SMT1/SMT2/SMT3 medium pass
Garb08G0014320 Steroid SMT1/SMT2/SMT3 low borderline
Garb09G0003000 Steroid SMT1/SMT2/SMT3 medium pass
Garb09G0013110 Steroid SMT1/SMT2/SMT3 medium pass
Garb10G0002120 Steroid SMT1/SMT2/SMT3 medium pass
Garb10G0004960 Steroid SMT1/SMT2/SMT3 medium pass
Garb10G0009290 Steroid SMT1/SMT2/SMT3 medium pass
Garb10G0009300 Steroid SMT1/SMT2/SMT3 medium pass
Garb10G0010130 Steroid SMT1/SMT2/SMT3 medium pass
Garb10G0022620 Steroid SMT1/SMT2/SMT3 low borderline
Garb10G0022630 Steroid SMT1/SMT2/SMT3 low borderline
Garb10G0037940 Steroid SMT1/SMT2/SMT3 low borderline
Garb11G0003990 Steroid SMT1/SMT2/SMT3 medium pass
Garb11G0015760 Steroid SMT1/SMT2/SMT3 low borderline
Garb11G0028320 Steroid SMT1/SMT2/SMT3 low borderline
Garb12G0002730 Steroid SMT1/SMT2/SMT3 low borderline
Garb12G0002800 Steroid SMT1/SMT2/SMT3 low borderline
Garb12G0008530 Steroid SMT1/SMT2/SMT3 low borderline
Garb12G0008540 Steroid SMT1/SMT2/SMT3 medium pass
Garb12G0009010 Steroid SMT1/SMT2/SMT3 medium pass