PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Garb10G0021110 Steroid DWF4/CYP90B1 low borderline
Garb10G0021120 Steroid DWF4/CYP90B1 low borderline
Garb10G0023040 Steroid DWF4/CYP90B1 low borderline
Garb10G0030670 Steroid DWF4/CYP90B1 medium borderline
Garb10G0036100 Steroid DWF4/CYP90B1 medium borderline
Garb11G0000760 Steroid DWF4/CYP90B1 medium borderline
Garb11G0001600 Steroid DWF4/CYP90B1 low borderline
Garb11G0018870 Steroid DWF4/CYP90B1 low borderline
Garb11G0021700 Steroid DWF4/CYP90B1 medium borderline
Garb11G0025570 Steroid DWF4/CYP90B1 low borderline
Garb12G0000130 Steroid DWF4/CYP90B1 medium borderline
Garb12G0009410 Steroid DWF4/CYP90B1 low borderline
Garb12G0018960 Steroid DWF4/CYP90B1 low borderline
Garb12G0020300 Steroid DWF4/CYP90B1 medium borderline
Garb12G0024760 Steroid DWF4/CYP90B1 low borderline
Garb12G0024770 Steroid DWF4/CYP90B1 low borderline
Garb12G0024780 Steroid DWF4/CYP90B1 low borderline
Garb13G0011030 Steroid DWF4/CYP90B1 medium borderline
Garb13G0012240 Steroid DWF4/CYP90B1 medium borderline
Garb13G0016600 Steroid DWF4/CYP90B1 low borderline
Garb13G0016620 Steroid DWF4/CYP90B1 low borderline
Garb13G0019170 Steroid DWF4/CYP90B1 low borderline
Garb13G0020360 Steroid DWF4/CYP90B1 low borderline
Garb13G0025240 Steroid DWF4/CYP90B1 medium borderline
Garb08G0001490 Steroid DWF5 low borderline
Garb09G0014430 Steroid DWF5 medium pass
Garb01G0019720 Steroid DWF7 medium pass
Garb02G0012270 Steroid FK high pass
Garb11G0015510 Steroid HYD1 high pass
Garb01G0027830 Steroid ROT3/CYP90C1 medium borderline
Garb01G0032580 Steroid ROT3/CYP90C1 medium borderline
Garb03G0003180 Steroid ROT3/CYP90C1 medium borderline
Garb03G0003190 Steroid ROT3/CYP90C1 medium borderline
Garb03G0025600 Steroid ROT3/CYP90C1 low borderline
Garb04G0022500 Steroid ROT3/CYP90C1 medium borderline
Garb06G0033610 Steroid ROT3/CYP90C1 low borderline
Garb07G0008310 Steroid ROT3/CYP90C1 medium borderline
Garb07G0014750 Steroid ROT3/CYP90C1 medium borderline
Garb07G0016000 Steroid ROT3/CYP90C1 medium borderline
Garb07G0016020 Steroid ROT3/CYP90C1 medium borderline
Garb07G0016040 Steroid ROT3/CYP90C1 medium borderline
Garb08G0022910 Steroid ROT3/CYP90C1 low borderline
Garb11G0029640 Steroid ROT3/CYP90C1 low borderline
Garb12G0026610 Steroid ROT3/CYP90C1 medium borderline
Garb13G0010980 Steroid ROT3/CYP90C1 medium borderline
Garb13G0011050 Steroid ROT3/CYP90C1 medium borderline
Garb13G0017840 Steroid ROT3/CYP90C1 medium borderline
Garb13G0020290 Steroid ROT3/CYP90C1 medium borderline
Garb03G0004480 Steroid SMO1/SMO2 medium pass
Garb06G0020650 Steroid SMO1/SMO2 medium pass