PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Garb04G0017880 Steroid DWF4/CYP90B1 low borderline
Garb04G0020150 Steroid DWF4/CYP90B1 low borderline
Garb04G0020160 Steroid DWF4/CYP90B1 low borderline
Garb04G0020170 Steroid DWF4/CYP90B1 low borderline
Garb04G0030180 Steroid DWF4/CYP90B1 low borderline
Garb04G0030190 Steroid DWF4/CYP90B1 low borderline
Garb04G0030200 Steroid DWF4/CYP90B1 low borderline
Garb04G0031960 Steroid DWF4/CYP90B1 low borderline
Garb04G0031980 Steroid DWF4/CYP90B1 low borderline
Garb05G0010170 Steroid DWF4/CYP90B1 low borderline
Garb05G0016010 Steroid DWF4/CYP90B1 medium borderline
Garb06G0000220 Steroid DWF4/CYP90B1 low borderline
Garb06G0013720 Steroid DWF4/CYP90B1 low borderline
Garb06G0018400 Steroid DWF4/CYP90B1 low borderline
Garb06G0021640 Steroid DWF4/CYP90B1 low borderline
Garb06G0022110 Steroid DWF4/CYP90B1 low borderline
Garb06G0025190 Steroid DWF4/CYP90B1 low borderline
Garb06G0025650 Steroid DWF4/CYP90B1 low borderline
Garb06G0026500 Steroid DWF4/CYP90B1 low borderline
Garb06G0033630 Steroid DWF4/CYP90B1 medium borderline
Garb06G0033920 Steroid DWF4/CYP90B1 low borderline
Garb07G0002690 Steroid DWF4/CYP90B1 low borderline
Garb07G0006290 Steroid DWF4/CYP90B1 low borderline
Garb07G0011730 Steroid DWF4/CYP90B1 low borderline
Garb07G0011750 Steroid DWF4/CYP90B1 low borderline
Garb07G0014280 Steroid DWF4/CYP90B1 low borderline
Garb07G0014300 Steroid DWF4/CYP90B1 low borderline
Garb07G0016010 Steroid DWF4/CYP90B1 medium borderline
Garb07G0024980 Steroid DWF4/CYP90B1 low borderline
Garb07G0028530 Steroid DWF4/CYP90B1 low borderline
Garb07G0030820 Steroid DWF4/CYP90B1 low borderline
Garb07G0031030 Steroid DWF4/CYP90B1 medium borderline
Garb08G0002250 Steroid DWF4/CYP90B1 low borderline
Garb08G0002480 Steroid DWF4/CYP90B1 medium borderline
Garb08G0006050 Steroid DWF4/CYP90B1 low borderline
Garb08G0008010 Steroid DWF4/CYP90B1 low borderline
Garb08G0012430 Steroid DWF4/CYP90B1 low borderline
Garb08G0027860 Steroid DWF4/CYP90B1 low borderline
Garb09G0000080 Steroid DWF4/CYP90B1 low borderline
Garb09G0000110 Steroid DWF4/CYP90B1 low borderline
Garb09G0000130 Steroid DWF4/CYP90B1 low borderline
Garb09G0000140 Steroid DWF4/CYP90B1 low borderline
Garb09G0000150 Steroid DWF4/CYP90B1 low borderline
Garb09G0003220 Steroid DWF4/CYP90B1 low borderline
Garb09G0003240 Steroid DWF4/CYP90B1 low borderline
Garb09G0003250 Steroid DWF4/CYP90B1 low borderline
Garb09G0018300 Steroid DWF4/CYP90B1 low borderline
Garb09G0020440 Steroid DWF4/CYP90B1 low borderline
Garb10G0001740 Steroid DWF4/CYP90B1 low borderline
Garb10G0005730 Steroid DWF4/CYP90B1 low borderline