PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Pcabscaffold_381_1-3498320687200.1 Alkaloid H6H medium borderline
Pcabscaffold_3_2646351-60804880710320.1 Alkaloid H6H low borderline
Pcabscaffold_40_644123-29686580725420.1 Alkaloid H6H low borderline
Pcabscaffold_410725880.1 Alkaloid H6H low borderline
Pcabscaffold_4170730660.1 Alkaloid H6H low borderline
Pcabscaffold_4430752130.1 Alkaloid H6H low borderline
Pcabscaffold_4450752620.1 Alkaloid H6H low borderline
Pcabscaffold_46_1-34069640770290.1 Alkaloid H6H high pass
Pcabscaffold_46_1-34069640770300.1 Alkaloid H6H high pass
Pcabscaffold_46_1-34069640770360.1 Alkaloid H6H medium pass
Pcabscaffold_46_1-34069640770850.1 Alkaloid H6H high pass
Pcabscaffold_46_1-34069640770890.1 Alkaloid H6H high pass
Pcabscaffold_46_1-34069640770970.1 Alkaloid H6H medium pass
Pcabscaffold_4730778240.1 Alkaloid H6H medium pass
Pcabscaffold_4740779370.1 Alkaloid H6H high pass
Pcabscaffold_4910793850.1 Alkaloid H6H low borderline
Pcabscaffold_4910793860.1 Alkaloid H6H low borderline
Pcabscaffold_4910793870.1 Alkaloid H6H low borderline
Pcabscaffold_4910793880.1 Alkaloid H6H low borderline
Pcabscaffold_4910793890.1 Alkaloid H6H low borderline
Pcabscaffold_4_900905-60197250801490.1 Alkaloid H6H medium borderline
Pcabscaffold_500810090.1 Alkaloid H6H medium borderline
Pcabscaffold_5130821990.1 Alkaloid H6H low borderline
Pcabscaffold_530831310.1 Alkaloid H6H low borderline
Pcabscaffold_5340837180.1 Alkaloid H6H low borderline
Pcabscaffold_570861240.1 Alkaloid H6H medium borderline
Pcabscaffold_5750866150.1 Alkaloid H6H low borderline
Pcabscaffold_5790867990.1 Alkaloid H6H low borderline
Pcabscaffold_610890800.1 Alkaloid H6H medium borderline
Pcabscaffold_630904590.1 Alkaloid H6H low borderline
Pcabscaffold_630904600.1 Alkaloid H6H low borderline
Pcabscaffold_630904610.1 Alkaloid H6H low borderline
Pcabscaffold_630905550.1 Alkaloid H6H low borderline
Pcabscaffold_650916300.1 Alkaloid H6H low borderline
Pcabscaffold_6690926940.1 Alkaloid H6H low borderline
Pcabscaffold_6730929870.1 Alkaloid H6H low borderline
Pcabscaffold_6780932090.1 Alkaloid H6H medium pass
Pcabscaffold_7260957410.1 Alkaloid H6H low borderline
Pcabscaffold_7300963350.1 Alkaloid H6H high pass
Pcabscaffold_7450967920.1 Alkaloid H6H high pass
Pcabscaffold_74_258846-35974070972490.1 Alkaloid H6H low borderline
Pcabscaffold_7550975770.1 Alkaloid H6H high pass
Pcabscaffold_780988950.1 Alkaloid H6H high pass
Pcabscaffold_7820990530.1 Alkaloid H6H low borderline
Pcabscaffold_7820990540.1 Alkaloid H6H low borderline
Pcabscaffold_7820990550.1 Alkaloid H6H low borderline
Pcabscaffold_7820990560.1 Alkaloid H6H low borderline
Pcabscaffold_7820990570.1 Alkaloid H6H low borderline
Pcabscaffold_80_83762-22329471011070.1 Alkaloid H6H low borderline
Pcabscaffold_80_83762-22329471011080.1 Alkaloid H6H low borderline