PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pcabscaffold_1440195070.1 Alkaloid 7DLGT low borderline
Pcabscaffold_14540201670.1 Alkaloid 7DLGT low borderline
Pcabscaffold_14540201680.1 Alkaloid 7DLGT low borderline
Pcabscaffold_147_1-13211470208740.1 Alkaloid 7DLGT low borderline
Pcabscaffold_147_1-13211470209000.1 Alkaloid 7DLGT low borderline
Pcabscaffold_147_1-13211470209100.1 Alkaloid 7DLGT low borderline
Pcabscaffold_14830212980.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1500222210.1 Alkaloid 7DLGT low borderline
Pcabscaffold_150218770.1 Alkaloid 7DLGT high pass
Pcabscaffold_150218790.1 Alkaloid 7DLGT high pass
Pcabscaffold_150218800.1 Alkaloid 7DLGT high pass
Pcabscaffold_150218810.1 Alkaloid 7DLGT high pass
Pcabscaffold_150218830.1 Alkaloid 7DLGT high pass
Pcabscaffold_150218840.1 Alkaloid 7DLGT low borderline
Pcabscaffold_150218850.1 Alkaloid 7DLGT low borderline
Pcabscaffold_150218860.1 Alkaloid 7DLGT high pass
Pcabscaffold_150218870.1 Alkaloid 7DLGT medium pass
Pcabscaffold_150218880.1 Alkaloid 7DLGT high pass
Pcabscaffold_150218890.1 Alkaloid 7DLGT medium pass
Pcabscaffold_150218900.1 Alkaloid 7DLGT medium pass
Pcabscaffold_15080224090.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1510224860.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1510225090.1 Alkaloid 7DLGT high pass
Pcabscaffold_1510225100.1 Alkaloid 7DLGT medium pass
Pcabscaffold_15110226970.1 Alkaloid 7DLGT medium pass
Pcabscaffold_15740246210.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1580248070.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1580248780.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1580250880.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1580250890.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1580250900.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1580250910.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1580250920.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1580251020.1 Alkaloid 7DLGT low borderline
Pcabscaffold_159_1-16866950255050.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1600259550.1 Alkaloid 7DLGT medium pass
Pcabscaffold_1600260350.1 Alkaloid 7DLGT medium pass
Pcabscaffold_1600260360.1 Alkaloid 7DLGT high pass
Pcabscaffold_161_179220-17084620264230.1 Alkaloid 7DLGT low borderline
Pcabscaffold_161_179220-17084620264250.1 Alkaloid 7DLGT low borderline
Pcabscaffold_161_179220-17084620265140.1 Alkaloid 7DLGT low borderline
Pcabscaffold_16240267800.1 Alkaloid 7DLGT low borderline
Pcabscaffold_16360270480.1 Alkaloid 7DLGT low borderline
Pcabscaffold_16360270490.1 Alkaloid 7DLGT medium pass
Pcabscaffold_16360270500.1 Alkaloid 7DLGT medium pass
Pcabscaffold_16360270510.1 Alkaloid 7DLGT medium pass
Pcabscaffold_16360270520.1 Alkaloid 7DLGT low borderline
Pcabscaffold_16360270530.1 Alkaloid 7DLGT low borderline
Pcabscaffold_16360270670.1 Alkaloid 7DLGT medium pass
Pcabscaffold_1640271810.1 Alkaloid 7DLGT medium pass