PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pcabscaffold_20385950.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20385980.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20386210.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20386240.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20386250.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20386260.1 Alkaloid 7DLGT low borderline
Pcabscaffold_2040402700.1 Alkaloid 7DLGT low borderline
Pcabscaffold_2040402720.1 Alkaloid 7DLGT medium pass
Pcabscaffold_2060408060.1 Alkaloid 7DLGT low borderline
Pcabscaffold_2070410000.1 Alkaloid 7DLGT medium pass
Pcabscaffold_2070410060.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20780411300.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20780411320.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20780411330.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20780411340.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20780411360.1 Alkaloid 7DLGT medium pass
Pcabscaffold_20780411380.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20780411410.1 Alkaloid 7DLGT medium pass
Pcabscaffold_20780411440.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20980414020.1 Alkaloid 7DLGT low borderline
Pcabscaffold_20980414030.1 Alkaloid 7DLGT medium pass
Pcabscaffold_20980414050.1 Alkaloid 7DLGT medium pass
Pcabscaffold_20980414060.1 Alkaloid 7DLGT low borderline
Pcabscaffold_210416740.1 Alkaloid 7DLGT low borderline
Pcabscaffold_21190420580.1 Alkaloid 7DLGT high pass
Pcabscaffold_21190420590.1 Alkaloid 7DLGT low borderline
Pcabscaffold_21190420600.1 Alkaloid 7DLGT medium pass
Pcabscaffold_2140426540.1 Alkaloid 7DLGT low borderline
Pcabscaffold_21500428750.1 Alkaloid 7DLGT low borderline
Pcabscaffold_220_1-13634480442700.1 Alkaloid 7DLGT low borderline
Pcabscaffold_22390448020.1 Alkaloid 7DLGT low borderline
Pcabscaffold_22390448030.1 Alkaloid 7DLGT low borderline
Pcabscaffold_2240448280.1 Alkaloid 7DLGT low borderline
Pcabscaffold_22480451190.1 Alkaloid 7DLGT medium pass
Pcabscaffold_2270455850.1 Alkaloid 7DLGT low borderline
Pcabscaffold_22740456390.1 Alkaloid 7DLGT low borderline
Pcabscaffold_2290458700.1 Alkaloid 7DLGT medium pass
Pcabscaffold_230465220.1 Alkaloid 7DLGT low borderline
Pcabscaffold_230465230.1 Alkaloid 7DLGT low borderline
Pcabscaffold_230465240.1 Alkaloid 7DLGT medium pass
Pcabscaffold_2320469550.1 Alkaloid 7DLGT low borderline
Pcabscaffold_2320469820.1 Alkaloid 7DLGT low borderline
Pcabscaffold_2320469830.1 Alkaloid 7DLGT low borderline
Pcabscaffold_2320469840.1 Alkaloid 7DLGT low borderline
Pcabscaffold_23380472430.1 Alkaloid 7DLGT high pass
Pcabscaffold_23380472440.1 Alkaloid 7DLGT medium pass
Pcabscaffold_23380472450.1 Alkaloid 7DLGT medium pass
Pcabscaffold_2340472930.1 Alkaloid 7DLGT medium pass
Pcabscaffold_2340472940.1 Alkaloid 7DLGT high pass
Pcabscaffold_2340472960.1 Alkaloid 7DLGT low borderline