PlantSME Plant secondary metabolism enzyme database

Rhynchospora pubera (rhynchospora_pubera)

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Imported from atlas release summary for Rhynchospora pubera.

6073
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1564 19 UGT (637) View species results
Alkaloid pathway 1412 23 7DLGT (272) View species results
Phenylpropanoid pathway 1386 11 POD (610) View species results
Flavonoid pathway 944 13 UFGT (575) View species results
Rosmarinic acid pathway 481 7 C4H (216) View species results
Steroid pathway 286 13 SMT1/SMT2/SMT3 (113) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5282 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP51G1
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Gene Pathway Family Confidence Status
rhynchospora_pubera_mRNA16058 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA16427 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA16428 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA1659 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA19898 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA22108 Steroid CYP51G1 low borderline
rhynchospora_pubera_mRNA24545 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA24547 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA26969 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA28484 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA29839 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA29840 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA30347 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA31366 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA32752 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA32755 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA32767 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA35054 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA35423 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA38289 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA4117 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA41810 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA43348 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA44698 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA44699 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA44700 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA44701 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA45191 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA46207 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA47620 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA47623 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA47635 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA47779 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA51581 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA58724 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA59099 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA59100 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA61279 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA61281 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA61643 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA6622 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA69878 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA69881 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA69883 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA72286 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA72289 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA74906 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA74944 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA74945 Steroid CYP51G1 medium borderline
rhynchospora_pubera_mRNA75439 Steroid CYP51G1 medium borderline