PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
Csimscaffold3660317080 Flavonoid 4CL low borderline
Csimscaffold3850325810 Flavonoid 4CL medium pass
Csimscaffold4010335390 Flavonoid 4CL medium pass
Csimscaffold40333650 Flavonoid 4CL low borderline
Csimscaffold4500357480 Flavonoid 4CL medium pass
Csimscaffold4500357500 Flavonoid 4CL medium pass
Csimscaffold4500357510 Flavonoid 4CL medium pass
Csimscaffold4610361590 Flavonoid 4CL medium pass
Csimscaffold4780366760 Flavonoid 4CL medium pass
Csimscaffold4900371400 Flavonoid 4CL low borderline
Csimscaffold4950373020 Flavonoid 4CL medium pass
Csimscaffold4950373030 Flavonoid 4CL medium pass
Csimscaffold4950373040 Flavonoid 4CL medium pass
Csimscaffold5850401200 Flavonoid 4CL medium pass
Csimscaffold6110409560 Flavonoid 4CL low borderline
Csimscaffold6660424430 Flavonoid 4CL medium pass
Csimscaffold700436130 Flavonoid 4CL medium pass
Csimscaffold700436150 Flavonoid 4CL low borderline
Csimscaffold700436160 Flavonoid 4CL medium pass
Csimscaffold7280443440 Flavonoid 4CL low borderline
Csimscaffold7360445810 Flavonoid 4CL low borderline
Csimscaffold7420447540 Flavonoid 4CL medium pass
Csimscaffold7530450130 Flavonoid 4CL low borderline
Csimscaffold760451870 Flavonoid 4CL medium pass
Csimscaffold7620452420 Flavonoid 4CL low borderline
Csimscaffold7950460890 Flavonoid 4CL medium pass
Csimscaffold8090465180 Flavonoid 4CL low borderline
Csimscaffold8460473640 Flavonoid 4CL medium pass
Csimscaffold8560476530 Flavonoid 4CL medium pass
Csimscaffold8560476540 Flavonoid 4CL medium pass
Csimscaffold8970486270 Flavonoid 4CL low borderline
Csimscaffold9100491230 Flavonoid 4CL medium pass
Csimscaffold9600503090 Flavonoid 4CL medium pass
Csimscaffold9600503100 Flavonoid 4CL medium pass
Csimscaffold9600503120 Flavonoid 4CL low borderline
Csimscaffold9600503130 Flavonoid 4CL low borderline
Csimscaffold9600503140 Flavonoid 4CL low borderline
Csimscaffold1000002100 Phenylpropanoid 4CL medium pass
Csimscaffold10070003470 Phenylpropanoid 4CL medium pass
Csimscaffold10470012360 Phenylpropanoid 4CL medium pass
Csimscaffold10470012370 Phenylpropanoid 4CL medium pass
Csimscaffold10930021860 Phenylpropanoid 4CL medium pass
Csimscaffold11570035620 Phenylpropanoid 4CL medium pass
Csimscaffold11570035650 Phenylpropanoid 4CL medium pass
Csimscaffold1180041390 Phenylpropanoid 4CL medium pass
Csimscaffold120046340 Phenylpropanoid 4CL medium pass
Csimscaffold12720059860 Phenylpropanoid 4CL medium pass
Csimscaffold12720059870 Phenylpropanoid 4CL medium pass
Csimscaffold1310067830 Phenylpropanoid 4CL medium pass
Csimscaffold1310067840 Phenylpropanoid 4CL medium pass