PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
Csimscaffold13380072340 Phenylpropanoid 4CL low borderline
Csimscaffold14350093300 Phenylpropanoid 4CL medium pass
Csimscaffold1490102620 Phenylpropanoid 4CL medium pass
Csimscaffold1580117790 Phenylpropanoid 4CL low borderline
Csimscaffold1620124260 Phenylpropanoid 4CL medium pass
Csimscaffold1620124270 Phenylpropanoid 4CL medium pass
Csimscaffold16260125230 Phenylpropanoid 4CL medium pass
Csimscaffold16370126600 Phenylpropanoid 4CL low borderline
Csimscaffold16370126610 Phenylpropanoid 4CL medium pass
Csimscaffold1750142370 Phenylpropanoid 4CL low borderline
Csimscaffold17600144020 Phenylpropanoid 4CL medium pass
Csimscaffold17860146880 Phenylpropanoid 4CL medium pass
Csimscaffold18440155310 Phenylpropanoid 4CL medium pass
Csimscaffold1910164130 Phenylpropanoid 4CL low borderline
Csimscaffold19490168750 Phenylpropanoid 4CL medium pass
Csimscaffold20050176700 Phenylpropanoid 4CL low borderline
Csimscaffold2050183360 Phenylpropanoid 4CL low borderline
Csimscaffold20780187540 Phenylpropanoid 4CL medium pass
Csimscaffold210190580 Phenylpropanoid 4CL low borderline
Csimscaffold21410195840 Phenylpropanoid 4CL medium pass
Csimscaffold22310205220 Phenylpropanoid 4CL low borderline
Csimscaffold23920222070 Phenylpropanoid 4CL medium pass
Csimscaffold240222840 Phenylpropanoid 4CL medium pass
Csimscaffold2560238260 Phenylpropanoid 4CL low borderline
Csimscaffold26700248970 Phenylpropanoid 4CL low borderline
Csimscaffold2750256590 Phenylpropanoid 4CL medium pass
Csimscaffold27670257770 Phenylpropanoid 4CL medium pass
Csimscaffold29120269880 Phenylpropanoid 4CL medium pass
Csimscaffold29120269890 Phenylpropanoid 4CL low borderline
Csimscaffold2970273470 Phenylpropanoid 4CL low borderline
Csimscaffold30276280 Phenylpropanoid 4CL medium pass
Csimscaffold3100284380 Phenylpropanoid 4CL low borderline
Csimscaffold33050297220 Phenylpropanoid 4CL low borderline
Csimscaffold33050297230 Phenylpropanoid 4CL low borderline
Csimscaffold3620314830 Phenylpropanoid 4CL medium pass
Csimscaffold3620314840 Phenylpropanoid 4CL medium pass
Csimscaffold3620314850 Phenylpropanoid 4CL medium pass
Csimscaffold3660317080 Phenylpropanoid 4CL low borderline
Csimscaffold3850325810 Phenylpropanoid 4CL medium pass
Csimscaffold4010335390 Phenylpropanoid 4CL medium pass
Csimscaffold40333650 Phenylpropanoid 4CL low borderline
Csimscaffold4500357480 Phenylpropanoid 4CL medium pass
Csimscaffold4500357500 Phenylpropanoid 4CL medium pass
Csimscaffold4500357510 Phenylpropanoid 4CL medium pass
Csimscaffold4610361590 Phenylpropanoid 4CL medium pass
Csimscaffold4780366760 Phenylpropanoid 4CL medium pass
Csimscaffold4900371400 Phenylpropanoid 4CL low borderline
Csimscaffold4950373020 Phenylpropanoid 4CL medium pass
Csimscaffold4950373030 Phenylpropanoid 4CL medium pass
Csimscaffold4950373040 Phenylpropanoid 4CL medium pass