PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
Csimscaffold16030121690 Alkaloid 7DLGT low borderline
Csimscaffold16670130730 Alkaloid 7DLGT medium pass
Csimscaffold16940134590 Alkaloid 7DLGT medium pass
Csimscaffold16940134600 Alkaloid 7DLGT medium pass
Csimscaffold170135440 Alkaloid 7DLGT medium pass
Csimscaffold170135460 Alkaloid 7DLGT medium pass
Csimscaffold170135490 Alkaloid 7DLGT medium pass
Csimscaffold17040136680 Alkaloid 7DLGT high pass
Csimscaffold17090137090 Alkaloid 7DLGT low borderline
Csimscaffold17090137100 Alkaloid 7DLGT medium pass
Csimscaffold17790145780 Alkaloid 7DLGT high pass
Csimscaffold180148990 Alkaloid 7DLGT low borderline
Csimscaffold1820152450 Alkaloid 7DLGT medium pass
Csimscaffold1820152470 Alkaloid 7DLGT low borderline
Csimscaffold18630157850 Alkaloid 7DLGT medium pass
Csimscaffold18730159000 Alkaloid 7DLGT low borderline
Csimscaffold18730159010 Alkaloid 7DLGT low borderline
Csimscaffold18820160040 Alkaloid 7DLGT high pass
Csimscaffold190162840 Alkaloid 7DLGT medium pass
Csimscaffold190162910 Alkaloid 7DLGT low borderline
Csimscaffold19030163640 Alkaloid 7DLGT low borderline
Csimscaffold19030163650 Alkaloid 7DLGT low borderline
Csimscaffold19810172820 Alkaloid 7DLGT medium pass
Csimscaffold20000176370 Alkaloid 7DLGT low borderline
Csimscaffold20000176390 Alkaloid 7DLGT medium pass
Csimscaffold20100177950 Alkaloid 7DLGT low borderline
Csimscaffold20100177960 Alkaloid 7DLGT medium pass
Csimscaffold2010177670 Alkaloid 7DLGT low borderline
Csimscaffold2010177690 Alkaloid 7DLGT low borderline
Csimscaffold2010177710 Alkaloid 7DLGT low borderline
Csimscaffold210190750 Alkaloid 7DLGT medium pass
Csimscaffold210190770 Alkaloid 7DLGT medium pass
Csimscaffold210190780 Alkaloid 7DLGT high pass
Csimscaffold21290194400 Alkaloid 7DLGT medium pass
Csimscaffold21750198860 Alkaloid 7DLGT low borderline
Csimscaffold21750198890 Alkaloid 7DLGT low borderline
Csimscaffold21750198900 Alkaloid 7DLGT low borderline
Csimscaffold21780199090 Alkaloid 7DLGT low borderline
Csimscaffold21790199160 Alkaloid 7DLGT low borderline
Csimscaffold21980200840 Alkaloid 7DLGT medium pass
Csimscaffold22100203040 Alkaloid 7DLGT medium pass
Csimscaffold22100203050 Alkaloid 7DLGT low borderline
Csimscaffold22100203080 Alkaloid 7DLGT low borderline
Csimscaffold22140203200 Alkaloid 7DLGT medium pass
Csimscaffold22140203230 Alkaloid 7DLGT low borderline
Csimscaffold2260207800 Alkaloid 7DLGT low borderline
Csimscaffold2260207820 Alkaloid 7DLGT medium pass
Csimscaffold22860210350 Alkaloid 7DLGT low borderline
Csimscaffold2320214850 Alkaloid 7DLGT medium pass
Csimscaffold23280215730 Alkaloid 7DLGT medium pass