PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Csimscaffold3510309330 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold3530310180 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold35960313310 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold36260315370 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold3680317920 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold3800323900 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold390328400 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold4130341300 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold4430354570 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold4430354620 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold480367590 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold5470390270 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold5550392620 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold5870401600 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold5930404060 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold610409190 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6120409570 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6120409590 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6120409610 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6120409620 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6570422020 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6570422030 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6570422040 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6570422080 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6570422090 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6570422100 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6570422110 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6570422120 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold6570422150 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold7020437000 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold7700454850 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold8100465710 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold8840483380 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold8910485150 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold9300496340 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold9580502430 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold960502880 Steroid BR6OX2/CYP85A2 low borderline
Csimscaffold9830508760 Steroid BR6OX2/CYP85A2 low borderline