PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status
Csimscaffold100001440 Phenylpropanoid CAD low borderline
Csimscaffold1030008440 Phenylpropanoid CAD low borderline
Csimscaffold1030008480 Phenylpropanoid CAD low borderline
Csimscaffold1030008490 Phenylpropanoid CAD low borderline
Csimscaffold1030008500 Phenylpropanoid CAD medium pass
Csimscaffold10570014260 Phenylpropanoid CAD medium pass
Csimscaffold1080019180 Phenylpropanoid CAD low borderline
Csimscaffold11060024870 Phenylpropanoid CAD medium pass
Csimscaffold11870043310 Phenylpropanoid CAD medium pass
Csimscaffold12110049180 Phenylpropanoid CAD medium pass
Csimscaffold13220069870 Phenylpropanoid CAD medium pass
Csimscaffold13380072360 Phenylpropanoid CAD medium borderline
Csimscaffold13380072380 Phenylpropanoid CAD low borderline
Csimscaffold13380072390 Phenylpropanoid CAD medium borderline
Csimscaffold13380072400 Phenylpropanoid CAD medium borderline
Csimscaffold13380072410 Phenylpropanoid CAD low borderline
Csimscaffold13400073270 Phenylpropanoid CAD medium pass
Csimscaffold1380082680 Phenylpropanoid CAD medium pass
Csimscaffold1380082960 Phenylpropanoid CAD medium borderline
Csimscaffold1380082970 Phenylpropanoid CAD medium borderline
Csimscaffold14210090880 Phenylpropanoid CAD medium pass
Csimscaffold15580114300 Phenylpropanoid CAD low borderline
Csimscaffold15660115630 Phenylpropanoid CAD low borderline
Csimscaffold15860118630 Phenylpropanoid CAD low borderline
Csimscaffold16150123570 Phenylpropanoid CAD low borderline
Csimscaffold16480127900 Phenylpropanoid CAD low borderline
Csimscaffold16950134710 Phenylpropanoid CAD medium pass
Csimscaffold16950134730 Phenylpropanoid CAD medium pass
Csimscaffold16950134740 Phenylpropanoid CAD medium pass
Csimscaffold17000136180 Phenylpropanoid CAD low borderline
Csimscaffold19370167360 Phenylpropanoid CAD medium borderline
Csimscaffold2060184930 Phenylpropanoid CAD medium pass
Csimscaffold2060184940 Phenylpropanoid CAD medium pass
Csimscaffold20830188470 Phenylpropanoid CAD low borderline
Csimscaffold21390195380 Phenylpropanoid CAD low borderline
Csimscaffold21500196580 Phenylpropanoid CAD low borderline
Csimscaffold21500196590 Phenylpropanoid CAD medium pass
Csimscaffold21920200460 Phenylpropanoid CAD low borderline
Csimscaffold22090202770 Phenylpropanoid CAD medium borderline
Csimscaffold2230204970 Phenylpropanoid CAD low borderline
Csimscaffold2300212900 Phenylpropanoid CAD medium pass
Csimscaffold2300212910 Phenylpropanoid CAD medium pass
Csimscaffold23430217340 Phenylpropanoid CAD medium pass
Csimscaffold2390221780 Phenylpropanoid CAD low borderline
Csimscaffold24160225340 Phenylpropanoid CAD medium pass
Csimscaffold24160225380 Phenylpropanoid CAD medium pass
Csimscaffold2420225760 Phenylpropanoid CAD low borderline
Csimscaffold24230226080 Phenylpropanoid CAD low borderline
Csimscaffold2510233970 Phenylpropanoid CAD low borderline
Csimscaffold2590240810 Phenylpropanoid CAD medium pass