PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
Csimscaffold5100379290 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold5530392090 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold5530392110 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold5900402930 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Csimscaffold620411530 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold6700426170 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Csimscaffold6830430100 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold6930433230 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
Csimscaffold900488110 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold900488120 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold9140492120 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Csimscaffold9140492130 Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
Csimscaffold9140492140 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
Csimscaffold9140492150 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
Csimscaffold9140492210 Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
Csimscaffold9200494290 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold9220494630 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Csimscaffold9290495860 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold9730506140 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold9730506150 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold9730506160 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold9730506170 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold9730506180 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold9730506190 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold9730506200 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Csimscaffold9730506220 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA