PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
Csimscaffold5630394850 Alkaloid CODM/T6ODM medium borderline
Csimscaffold6480419280 Alkaloid CODM/T6ODM medium borderline
Csimscaffold6750427430 Alkaloid CODM/T6ODM medium borderline
Csimscaffold6970434230 Alkaloid CODM/T6ODM medium borderline
Csimscaffold7080438100 Alkaloid CODM/T6ODM medium borderline
Csimscaffold7120439470 Alkaloid CODM/T6ODM medium borderline
Csimscaffold7470448650 Alkaloid CODM/T6ODM medium borderline
Csimscaffold7680453940 Alkaloid CODM/T6ODM medium borderline
Csimscaffold80462560 Alkaloid CODM/T6ODM medium borderline
Csimscaffold8060464760 Alkaloid CODM/T6ODM medium borderline
Csimscaffold8240468930 Alkaloid CODM/T6ODM medium borderline
Csimscaffold8240468940 Alkaloid CODM/T6ODM low borderline
Csimscaffold830470360 Alkaloid CODM/T6ODM medium borderline
Csimscaffold8530476090 Alkaloid CODM/T6ODM medium borderline
Csimscaffold870480000 Alkaloid CODM/T6ODM medium borderline
Csimscaffold890484680 Alkaloid CODM/T6ODM medium borderline
Csimscaffold9630503870 Alkaloid CODM/T6ODM medium borderline
Csimscaffold9910511060 Alkaloid CODM/T6ODM medium borderline