PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
Csimscaffold16320126140 Terpenoid CYP76 medium borderline
Csimscaffold1660129890 Terpenoid CYP76 low borderline
Csimscaffold16850133170 Terpenoid CYP76 medium borderline
Csimscaffold17970148250 Terpenoid CYP76 medium pass
Csimscaffold1800149570 Terpenoid CYP76 medium pass
Csimscaffold1820152320 Terpenoid CYP76 low borderline
Csimscaffold18250153170 Terpenoid CYP76 medium pass
Csimscaffold1830153920 Terpenoid CYP76 medium borderline
Csimscaffold18520156470 Terpenoid CYP76 low borderline
Csimscaffold18780159370 Terpenoid CYP76 medium borderline
Csimscaffold18780159380 Terpenoid CYP76 medium borderline
Csimscaffold190162670 Terpenoid CYP76 medium pass
Csimscaffold19130164790 Terpenoid CYP76 medium pass
Csimscaffold19830172920 Terpenoid CYP76 medium borderline
Csimscaffold20170178490 Terpenoid CYP76 low borderline
Csimscaffold21130192850 Terpenoid CYP76 medium borderline
Csimscaffold21130192860 Terpenoid CYP76 medium pass
Csimscaffold21130192870 Terpenoid CYP76 medium borderline
Csimscaffold21130192890 Terpenoid CYP76 medium borderline
Csimscaffold21320194860 Terpenoid CYP76 low borderline
Csimscaffold21610197630 Terpenoid CYP76 medium pass
Csimscaffold21760198910 Terpenoid CYP76 medium borderline
Csimscaffold2200202010 Terpenoid CYP76 low borderline
Csimscaffold2200202020 Terpenoid CYP76 low borderline
Csimscaffold22030202370 Terpenoid CYP76 medium pass
Csimscaffold22030202380 Terpenoid CYP76 medium pass
Csimscaffold22300205170 Terpenoid CYP76 medium pass
Csimscaffold22300205180 Terpenoid CYP76 low borderline
Csimscaffold22300205190 Terpenoid CYP76 medium pass
Csimscaffold22530207470 Terpenoid CYP76 medium pass
Csimscaffold2280209860 Terpenoid CYP76 medium pass
Csimscaffold22870210390 Terpenoid CYP76 medium pass
Csimscaffold22870210400 Terpenoid CYP76 medium pass
Csimscaffold2330216030 Terpenoid CYP76 medium pass
Csimscaffold23330216350 Terpenoid CYP76 low borderline
Csimscaffold2340216710 Terpenoid CYP76 low borderline
Csimscaffold23700220060 Terpenoid CYP76 medium borderline
Csimscaffold2380221010 Terpenoid CYP76 medium pass
Csimscaffold24870231610 Terpenoid CYP76 medium pass
Csimscaffold2500233300 Terpenoid CYP76 medium borderline
Csimscaffold2500233310 Terpenoid CYP76 medium borderline
Csimscaffold2500233320 Terpenoid CYP76 medium borderline
Csimscaffold2760257200 Terpenoid CYP76 medium borderline
Csimscaffold27940259690 Terpenoid CYP76 medium pass
Csimscaffold280259940 Terpenoid CYP76 medium borderline
Csimscaffold28280263120 Terpenoid CYP76 medium pass
Csimscaffold28930267520 Terpenoid CYP76 medium pass
Csimscaffold28930267540 Terpenoid CYP76 medium borderline
Csimscaffold28990267690 Terpenoid CYP76 medium pass
Csimscaffold290267970 Terpenoid CYP76 medium borderline