PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Csimscaffold10410011350 Steroid DWF4/CYP90B1 low borderline
Csimscaffold10960022200 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold11150026560 Steroid DWF4/CYP90B1 low borderline
Csimscaffold11690038460 Steroid DWF4/CYP90B1 low borderline
Csimscaffold11690038470 Steroid DWF4/CYP90B1 low borderline
Csimscaffold11700039170 Steroid DWF4/CYP90B1 low borderline
Csimscaffold1180041250 Steroid DWF4/CYP90B1 low borderline
Csimscaffold11940044920 Steroid DWF4/CYP90B1 low borderline
Csimscaffold120046260 Steroid DWF4/CYP90B1 low borderline
Csimscaffold120046280 Steroid DWF4/CYP90B1 low borderline
Csimscaffold12240051400 Steroid DWF4/CYP90B1 low borderline
Csimscaffold12700059540 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold12850062000 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold13810083220 Steroid DWF4/CYP90B1 low borderline
Csimscaffold13810083230 Steroid DWF4/CYP90B1 low borderline
Csimscaffold14850101800 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold14950103450 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold15030105760 Steroid DWF4/CYP90B1 low borderline
Csimscaffold15030105770 Steroid DWF4/CYP90B1 low borderline
Csimscaffold15030105790 Steroid DWF4/CYP90B1 low borderline
Csimscaffold15080106490 Steroid DWF4/CYP90B1 low borderline
Csimscaffold15080106510 Steroid DWF4/CYP90B1 low borderline
Csimscaffold15150107910 Steroid DWF4/CYP90B1 low borderline
Csimscaffold15150107940 Steroid DWF4/CYP90B1 low borderline
Csimscaffold15350111040 Steroid DWF4/CYP90B1 low borderline
Csimscaffold15530113670 Steroid DWF4/CYP90B1 low borderline
Csimscaffold1620124110 Steroid DWF4/CYP90B1 low borderline
Csimscaffold1650128290 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold1660129890 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold16710131660 Steroid DWF4/CYP90B1 low borderline
Csimscaffold16710131680 Steroid DWF4/CYP90B1 low borderline
Csimscaffold1680132810 Steroid DWF4/CYP90B1 low borderline
Csimscaffold1680132820 Steroid DWF4/CYP90B1 low borderline
Csimscaffold16920134390 Steroid DWF4/CYP90B1 low borderline
Csimscaffold17000136150 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold17000136160 Steroid DWF4/CYP90B1 low borderline
Csimscaffold1720138500 Steroid DWF4/CYP90B1 low borderline
Csimscaffold17490142290 Steroid DWF4/CYP90B1 low borderline
Csimscaffold17490142300 Steroid DWF4/CYP90B1 low borderline
Csimscaffold17490142310 Steroid DWF4/CYP90B1 low borderline
Csimscaffold17750145360 Steroid DWF4/CYP90B1 low borderline
Csimscaffold17970148250 Steroid DWF4/CYP90B1 low borderline
Csimscaffold1820152320 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold18610157670 Steroid DWF4/CYP90B1 low borderline
Csimscaffold18610157680 Steroid DWF4/CYP90B1 low borderline
Csimscaffold18780159370 Steroid DWF4/CYP90B1 low borderline
Csimscaffold19160164960 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold19600170260 Steroid DWF4/CYP90B1 low borderline
Csimscaffold2040181740 Steroid DWF4/CYP90B1 low borderline
Csimscaffold2040181750 Steroid DWF4/CYP90B1 low borderline