PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Csimscaffold2040181770 Steroid DWF4/CYP90B1 low borderline
Csimscaffold20770187440 Steroid DWF4/CYP90B1 low borderline
Csimscaffold21600197580 Steroid DWF4/CYP90B1 low borderline
Csimscaffold21600197590 Steroid DWF4/CYP90B1 low borderline
Csimscaffold21600197610 Steroid DWF4/CYP90B1 low borderline
Csimscaffold21610197630 Steroid DWF4/CYP90B1 low borderline
Csimscaffold21760198910 Steroid DWF4/CYP90B1 low borderline
Csimscaffold21760198940 Steroid DWF4/CYP90B1 low borderline
Csimscaffold22530207470 Steroid DWF4/CYP90B1 low borderline
Csimscaffold2270208790 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold22750209200 Steroid DWF4/CYP90B1 low borderline
Csimscaffold2280209860 Steroid DWF4/CYP90B1 low borderline
Csimscaffold2330216030 Steroid DWF4/CYP90B1 low borderline
Csimscaffold23330216350 Steroid DWF4/CYP90B1 low borderline
Csimscaffold23700220060 Steroid DWF4/CYP90B1 low borderline
Csimscaffold2380221010 Steroid DWF4/CYP90B1 low borderline
Csimscaffold2500233310 Steroid DWF4/CYP90B1 low borderline
Csimscaffold25230235320 Steroid DWF4/CYP90B1 low borderline
Csimscaffold26670248400 Steroid DWF4/CYP90B1 low borderline
Csimscaffold27940259690 Steroid DWF4/CYP90B1 low borderline
Csimscaffold280259940 Steroid DWF4/CYP90B1 low borderline
Csimscaffold28280263130 Steroid DWF4/CYP90B1 low borderline
Csimscaffold28560265040 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold28930267520 Steroid DWF4/CYP90B1 low borderline
Csimscaffold28930267540 Steroid DWF4/CYP90B1 low borderline
Csimscaffold28990267690 Steroid DWF4/CYP90B1 low borderline
Csimscaffold29810274670 Steroid DWF4/CYP90B1 low borderline
Csimscaffold3070281710 Steroid DWF4/CYP90B1 low borderline
Csimscaffold31510287370 Steroid DWF4/CYP90B1 low borderline
Csimscaffold31510287380 Steroid DWF4/CYP90B1 low borderline
Csimscaffold31510287390 Steroid DWF4/CYP90B1 low borderline
Csimscaffold3180288990 Steroid DWF4/CYP90B1 low borderline
Csimscaffold3190289710 Steroid DWF4/CYP90B1 low borderline
Csimscaffold3310297660 Steroid DWF4/CYP90B1 low borderline
Csimscaffold3310297670 Steroid DWF4/CYP90B1 low borderline
Csimscaffold33240298490 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold34030303210 Steroid DWF4/CYP90B1 low borderline
Csimscaffold35530311610 Steroid DWF4/CYP90B1 low borderline
Csimscaffold3620315130 Steroid DWF4/CYP90B1 low borderline
Csimscaffold3710319510 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold3710319560 Steroid DWF4/CYP90B1 low borderline
Csimscaffold400334590 Steroid DWF4/CYP90B1 low borderline
Csimscaffold40100335400 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold4220345120 Steroid DWF4/CYP90B1 low borderline
Csimscaffold4240345740 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold43240349790 Steroid DWF4/CYP90B1 low borderline
Csimscaffold4420354370 Steroid DWF4/CYP90B1 low borderline
Csimscaffold4420354390 Steroid DWF4/CYP90B1 low borderline
Csimscaffold4430354630 Steroid DWF4/CYP90B1 low borderline
Csimscaffold450357170 Steroid DWF4/CYP90B1 low borderline