PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Csimscaffold10190005880 Flavonoid F3H low borderline
Csimscaffold1040011140 Flavonoid F3H low borderline
Csimscaffold1070017020 Flavonoid F3H medium borderline
Csimscaffold1120027700 Flavonoid F3H low borderline
Csimscaffold11560035470 Flavonoid F3H medium borderline
Csimscaffold11660037800 Flavonoid F3H medium borderline
Csimscaffold11750040490 Flavonoid F3H low borderline
Csimscaffold1180041460 Flavonoid F3H low borderline
Csimscaffold13980085800 Flavonoid F3H medium borderline
Csimscaffold1430092570 Flavonoid F3H medium borderline
Csimscaffold14320092920 Flavonoid F3H medium borderline
Csimscaffold14430094680 Flavonoid F3H medium borderline
Csimscaffold14430094690 Flavonoid F3H medium borderline
Csimscaffold14500096210 Flavonoid F3H medium borderline
Csimscaffold14560097000 Flavonoid F3H low borderline
Csimscaffold14720099910 Flavonoid F3H low borderline
Csimscaffold14990103800 Flavonoid F3H medium borderline
Csimscaffold14990103810 Flavonoid F3H medium borderline
Csimscaffold15240109460 Flavonoid F3H low borderline
Csimscaffold15240109470 Flavonoid F3H low borderline
Csimscaffold160120840 Flavonoid F3H low borderline
Csimscaffold160120950 Flavonoid F3H medium borderline
Csimscaffold16540128950 Flavonoid F3H medium pass
Csimscaffold16750131960 Flavonoid F3H medium borderline
Csimscaffold17200138930 Flavonoid F3H medium borderline
Csimscaffold17400141330 Flavonoid F3H medium borderline
Csimscaffold1740141290 Flavonoid F3H low borderline
Csimscaffold180148870 Flavonoid F3H medium borderline
Csimscaffold180148880 Flavonoid F3H medium borderline
Csimscaffold18240153070 Flavonoid F3H medium borderline
Csimscaffold18240153100 Flavonoid F3H medium borderline
Csimscaffold18870160560 Flavonoid F3H medium borderline
Csimscaffold19310166860 Flavonoid F3H medium borderline
Csimscaffold19510169300 Flavonoid F3H medium pass
Csimscaffold19690170840 Flavonoid F3H medium borderline
Csimscaffold20060176790 Flavonoid F3H low borderline
Csimscaffold20175270 Flavonoid F3H medium borderline
Csimscaffold20840188570 Flavonoid F3H medium borderline
Csimscaffold21330194920 Flavonoid F3H low borderline
Csimscaffold2160197490 Flavonoid F3H medium borderline
Csimscaffold22510207340 Flavonoid F3H medium borderline
Csimscaffold2310213790 Flavonoid F3H medium borderline
Csimscaffold23200215220 Flavonoid F3H medium borderline
Csimscaffold23200215230 Flavonoid F3H medium borderline
Csimscaffold23730220240 Flavonoid F3H medium borderline
Csimscaffold23730220250 Flavonoid F3H medium borderline
Csimscaffold23730220260 Flavonoid F3H medium borderline
Csimscaffold2500233230 Flavonoid F3H medium borderline
Csimscaffold25200235200 Flavonoid F3H medium borderline
Csimscaffold25530237910 Flavonoid F3H medium borderline