PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
Csimscaffold22300205190 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold2330216030 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold23330216350 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold28280263120 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold29610273130 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold29810274670 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold31710288620 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold3180289020 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold3200290810 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold33240298490 Flavonoid F3'H/CYP75B low borderline
Csimscaffold3570312240 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold35960313300 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold3680317920 Flavonoid F3'H/CYP75B high pass
Csimscaffold3800323900 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold390328400 Flavonoid F3'H/CYP75B low borderline
Csimscaffold3910329270 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold39250329920 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold4130341300 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold43240349790 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold4430354570 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold4430354590 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold4430354610 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold4860369890 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold5000375530 Flavonoid F3'H/CYP75B low borderline
Csimscaffold5550392620 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold590402450 Flavonoid F3'H/CYP75B low borderline
Csimscaffold590402460 Flavonoid F3'H/CYP75B low borderline
Csimscaffold5930404060 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold610409190 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6120409620 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6540421280 Flavonoid F3'H/CYP75B low borderline
Csimscaffold6570422020 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6570422030 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6570422040 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6570422100 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6570422120 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6570422150 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold7020436990 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold740446850 Flavonoid F3'H/CYP75B low borderline
Csimscaffold770454430 Flavonoid F3'H/CYP75B low borderline
Csimscaffold770454450 Flavonoid F3'H/CYP75B low borderline
Csimscaffold7940460680 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold7980461380 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold8100465710 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold8910485050 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold8910485150 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold9280495700 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold9510501050 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold9830508760 Flavonoid F3'H/CYP75B medium borderline