PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
Csimscaffold11940044920 Alkaloid G8O/G8H medium borderline
Csimscaffold12240051390 Alkaloid G8O/G8H medium borderline
Csimscaffold12240051400 Alkaloid G8O/G8H medium borderline
Csimscaffold13180068960 Alkaloid G8O/G8H medium borderline
Csimscaffold13180068980 Alkaloid G8O/G8H medium borderline
Csimscaffold13450074310 Alkaloid G8O/G8H medium pass
Csimscaffold13550076660 Alkaloid G8O/G8H medium borderline
Csimscaffold15030105750 Alkaloid G8O/G8H medium borderline
Csimscaffold15420112070 Alkaloid G8O/G8H low borderline
Csimscaffold190162670 Alkaloid G8O/G8H low borderline
Csimscaffold20170178490 Alkaloid G8O/G8H low borderline
Csimscaffold21130192870 Alkaloid G8O/G8H medium borderline
Csimscaffold22300205170 Alkaloid G8O/G8H low borderline
Csimscaffold22300205180 Alkaloid G8O/G8H low borderline
Csimscaffold22300205190 Alkaloid G8O/G8H medium borderline
Csimscaffold2330216030 Alkaloid G8O/G8H medium borderline
Csimscaffold2340216710 Alkaloid G8O/G8H low borderline
Csimscaffold24870231610 Alkaloid G8O/G8H medium pass
Csimscaffold28280263120 Alkaloid G8O/G8H medium borderline
Csimscaffold300277000 Alkaloid G8O/G8H medium borderline
Csimscaffold30650281380 Alkaloid G8O/G8H low borderline
Csimscaffold3180288990 Alkaloid G8O/G8H medium borderline
Csimscaffold3490307620 Alkaloid G8O/G8H medium borderline
Csimscaffold3490307630 Alkaloid G8O/G8H medium borderline
Csimscaffold35960313300 Alkaloid G8O/G8H medium borderline
Csimscaffold35960313330 Alkaloid G8O/G8H medium borderline
Csimscaffold36260315370 Alkaloid G8O/G8H medium borderline
Csimscaffold3680317920 Alkaloid G8O/G8H medium borderline
Csimscaffold3910329290 Alkaloid G8O/G8H medium borderline
Csimscaffold39250329910 Alkaloid G8O/G8H medium borderline
Csimscaffold39250329930 Alkaloid G8O/G8H medium borderline
Csimscaffold4130341300 Alkaloid G8O/G8H medium borderline
Csimscaffold4220345120 Alkaloid G8O/G8H medium borderline
Csimscaffold4430354610 Alkaloid G8O/G8H medium borderline
Csimscaffold4430354620 Alkaloid G8O/G8H medium borderline
Csimscaffold4430354630 Alkaloid G8O/G8H medium borderline
Csimscaffold4770366530 Alkaloid G8O/G8H medium borderline
Csimscaffold5610394540 Alkaloid G8O/G8H medium borderline
Csimscaffold6120409590 Alkaloid G8O/G8H medium borderline
Csimscaffold6120409600 Alkaloid G8O/G8H medium borderline
Csimscaffold6120409650 Alkaloid G8O/G8H medium borderline
Csimscaffold6570422010 Alkaloid G8O/G8H low borderline
Csimscaffold6570422020 Alkaloid G8O/G8H low borderline
Csimscaffold6570422160 Alkaloid G8O/G8H low borderline
Csimscaffold770454430 Alkaloid G8O/G8H low borderline
Csimscaffold770454470 Alkaloid G8O/G8H medium borderline
Csimscaffold7840458250 Alkaloid G8O/G8H medium borderline
Csimscaffold7980461370 Alkaloid G8O/G8H medium pass
Csimscaffold80462650 Alkaloid G8O/G8H medium pass
Csimscaffold830470550 Alkaloid G8O/G8H medium borderline