PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Csimscaffold610408930 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Csimscaffold6220412530 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Csimscaffold6240413030 Alkaloid NMT medium pass NMT__00027__sp_Q10MI4_EZ1_ORYSJ
Csimscaffold6370416490 Alkaloid NMT medium borderline NMT__00015__sp_C8YTM5_PEAM2_WHEAT
Csimscaffold6970434130 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Csimscaffold6970434170 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Csimscaffold7010436680 Alkaloid NMT low borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Csimscaffold7360445780 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Csimscaffold7360445810 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Csimscaffold7540450490 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Csimscaffold7720455340 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
Csimscaffold7770456430 Alkaloid NMT medium borderline NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
Csimscaffold8050464370 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
Csimscaffold8140466460 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Csimscaffold8250469070 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Csimscaffold830470330 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Csimscaffold830470340 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Csimscaffold8370471960 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Csimscaffold8420473100 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Csimscaffold8450473490 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Csimscaffold850475150 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Csimscaffold880482500 Alkaloid NMT medium pass NMT__00034__sp_Q5VN06_CLF_ORYSJ
Csimscaffold8850483670 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Csimscaffold9050489670 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Csimscaffold940497840 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Csimscaffold9470499750 Alkaloid NMT low borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Csimscaffold9650504230 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Csimscaffold9800508290 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
Csimscaffold9950511640 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
Csimscaffold9950511660 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI